Gene Information

Name : agl6 (JDM1_2897)
Accession : YP_003064480.1
Strain : Lactobacillus plantarum JDM1
Genome accession: NC_012984
Putative virulence/resistance : Unknown
Product : alpha-glucosidase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 3128575 - 3130251 bp
Length : 1677 bp
Strand : -
Note : -

DNA sequence :
TTGGAAAAATGGTGGAAGAATGCAGTAGTTTATCAAGTTTATCCGTCTAGCTATCAAGACAGCAATAACGATGGTATTGG
TGATTTACCAGGGATTACAAAAAGATTGGATTATATTAAAAAGTTAGGCGTAGATATTGTTTGGCTAAGCCCGATCTATA
AATCACCGCAAGTTGATAATGGCTATGATATTTCAGACTATCGTGCGATCAATCCAGACTTTGGTAGCATGGAAGATTTT
GATAAGTTATTAGGGAAAGCCCATGATTTGGGACTGAAAATTATGATGGATCTTGTTGTTAATCATACTTCTGATGAAAA
TAAATGGTTTGAGGAGTCACGTAAGAGTAAGACTAATCCATACCGTGACTATTACATTTGGCGTGACGGTAACGCTGGTA
AGTCACCTAATAACTGGGGATCATTCTTTAGAGGCCCTGCTTGGAAATATGACGAACAAACAGGTCAATACTACTTGCAC
CTTTTTGCACCACAACAGCCGGACTTAAATTGGGAAAATCCAAATGTACGTCATTCTGTTTATGACATGATGAATTGGTG
GGCTAGTAAAGGTGTTGATGGGTTTAGGATGGATGTTATTAACTATATCTCTAAGCCTGAGGGATTGCCTGATGCACAAC
TACAAGCAGATGAAGAACTAGGAAATCCTGAACCATTAGTTGCTAATGGGCATCGTGTTCATGAATTCTTGCAAGAAATG
AATAATAAGGTTATGAGTAAGCACAGGATGGTGACAGTCGGTGAAGCCCCTTCTGTAACAACCGACGAAGCCATTAAGTA
TGCCGGCCTAGATGGAAAAGAATTGGATATGGTATTCCAGTTTGAACATATGGGGTTAGATGGTAATGAGAACCCTGTGC
TGGGGCATTGGTCTGATCGTAAGGTATCGCTAAAGGACCTCAGGAACAATCTTACTAAGTGGCAAGAAGCGCTTGAAGGT
AAGGCTTGGAATTCACTTTATTGGAATAATCATGATCAGCCAAGAGTAGTTTCAAGATTTGGTGATGATAGTAACGAGGA
ATACCGGATTTTAAGTGCTAAAATGCTAGCTACTATGCTCCATTTGCAACAGGGAACACCCTTTATATTTGAGGGTGAGG
AGATTGGCATGACGAATAGCTACTTCAAGAAACTGAGTGATTATGTTGACTTGGACTCAATCAATACTTATCACCAATTT
GTTGATAAACAGCATTTGGTTGATGGACAGACAATGCTCAAATATTTAGCGATGCACAGTAGAGACAATGCACGTACGCC
AATGCAGTGGGATTCAACTGATAATGGTGGTTTTTCTAAACATGAACCGTGGGAACACGTAAATCCTAATTACAAGCATA
TTAATGTCAAACAATCGTTGGATGACCCTAATTCTATCTTCTATTATTATCAAAAATTAATTAGACTTCGGCATGAGCTA
CCGGTTATTACTGATGGCAAGTATCGGTTGGTTAAGGGGAATGAAGACGACGAAGCGGTTTATGCTTATACACGTAAGGA
TGAAAATACGACATTACTGGTTATTCTAAATTATACAAAGACCACTCTAGACCGGGATTATCAAGTCCCGGACAATGCGG
AATTAGTGATTAACAATTACCCTGATGACAAAGGAAACACGCTTCGCCCATATGAAGCAAAGGTTTATAAATATTAA

Protein sequence :
MEKWWKNAVVYQVYPSSYQDSNNDGIGDLPGITKRLDYIKKLGVDIVWLSPIYKSPQVDNGYDISDYRAINPDFGSMEDF
DKLLGKAHDLGLKIMMDLVVNHTSDENKWFEESRKSKTNPYRDYYIWRDGNAGKSPNNWGSFFRGPAWKYDEQTGQYYLH
LFAPQQPDLNWENPNVRHSVYDMMNWWASKGVDGFRMDVINYISKPEGLPDAQLQADEELGNPEPLVANGHRVHEFLQEM
NNKVMSKHRMVTVGEAPSVTTDEAIKYAGLDGKELDMVFQFEHMGLDGNENPVLGHWSDRKVSLKDLRNNLTKWQEALEG
KAWNSLYWNNHDQPRVVSRFGDDSNEEYRILSAKMLATMLHLQQGTPFIFEGEEIGMTNSYFKKLSDYVDLDSINTYHQF
VDKQHLVDGQTMLKYLAMHSRDNARTPMQWDSTDNGGFSKHEPWEHVNPNYKHINVKQSLDDPNSIFYYYQKLIRLRHEL
PVITDGKYRLVKGNEDDEAVYAYTRKDENTTLLVILNYTKTTLDRDYQVPDNAELVINNYPDDKGNTLRPYEAKVYKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 7e-154 55