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Name : clpL (JDM1_2865) Accession : YP_003064448.1 Strain : Lactobacillus plantarum JDM1 Genome accession: NC_012984 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpL Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3092743 - 3094857 bp Length : 2115 bp Strand : - Note : - DNA sequence : ATGGCAAATTTCTACGGAAATGATCCTTTTTTCAACAATGATATGGATGATGTTTTCAATCAATTATTTCGGCGCATGGA TAATCAAAATTCGGAGCGTGCACGGTATTTAGTTAATGGACAATCGCTGACACCGGATGAGTTTGCTCAATACCGAGCAA CTGGTAAGCTACCCCAAAATAATAAAACAATAGAAGTATCTAAAGATGGTAAACAGGCTGTTAAAAAAGGGGGGATTTTA GAAAAGTTAGGGACTAATTTGACGGAACAGGCTCGTGATGGATTACTAGATCCAGTGATTGGACGTGAGAATGAGATTCA AGAAACTGCAGAAATTTTGAGTCGTAGGACGAAAAATAATCCAATCTTAGTTGGTGATGCTGGTGTAGGTAAAACTGCAG TCGTCGAAGGTCTGGCACAAGCAATTGTGGCTGGTAAAGTTCCAGAAACGATTCAAGATAAAGAAATCTATTCGATTGAT TTATCGTCTTTGGAAGCAGGAACTCAATATCGCGGTTCTTTTGAAGAAAATATTAAACAGCTAGTAAAGGAAGTTAAAGC AGCTGGTAATATTATTCTATTCTTCGATGAAATTCATCAGATTATCGGCACGGGCGCCACTGGTGGTGAAGATGGTGGCA AAGGATTGGCTGATATCATTAAACCTGCTTTGTCACGTGGCGAGCTGACTGTAATCGGGGCTACGACTCAAGATGAATAT CGCAATACTATTTTGAAAAATGCGGCTTTGGCACGGCGATTCAATGATGTTGTGATTAATGAACCGACGGCCGCTGACAC TTTACGTATATTACAAGGTGTTAAAAAGCTGTACGAAAAGCATCATCATGTTGTATTACCAGATGATGTTTTGAAGGCGG CTGTGGATTATTCAATCCAATATATACCACAACGCACTTTGCCAGATAAAGCTATCGATTTGATCGACATGACTGCGGCT CATTTAGCGGCTAAAAATTCGCAAACTGATGTTGAGACATTGGATCAACGCGTTAAAAAATTAGAGGCAGCTAAGGAGGC CGCCGTTAAATCGGAGGACTTTACAAAAGCCGCTGATATCAAGAAGTCGATCGAGGAAACCAAGCAAAAAATTAAAAAAA CGGATCAAAAAGAAAAAATCGCTGCCACGATTGATGATGTGGCACAATCGGTTGAACGTTTAACTGGTATACCAGTTGCT GATATGGGCGCTAATGATATTGAGCACTTGAAAAATCTTGATAAGCGTCTGAAAAGTAAGGTAATCGGTCAAGATGAAGC GGTTGAAATGGTAGCGAAGGCAATTCGGCGTAACCGTGCGGGCTTTTCAGAGGGTGATCAGCCAATTGGAAGTTTTCTGT TTGTGGGCCCAACTGGCGTAGGAAAGACTGAATTAGCTAAGCAATTAGCCTTAGATATGTTTGGAAATAAAAATGCGATT ATTCGGCTAGATATGAGTGAATATGCTGATCGTACAGCTGTGTCGAAATTAATTGGTACCTCGGCTGGATACGTAGGCTA TGAAGATAATGCTAATACTCTAACTGAACGAGTTCGGCGTAATCCATATTCCATTGTATTATTAGATGAAATTGAAAAGG CTGATCCACAAGTATTAACGTTACTGTTACAAGTGATGGATGATGGGCGCTTAACGGATGGACAAGGCAATGTCATTAAT TTCAAAAATACGATTATTATCGCTACTTCTAATGCTGGCTTTGGTAATGAAGCATTAAGTGGTGACAAGCAACGAGATCA GTCATTAATGGATAAGTTAGCACCATTTTTCCGCCCAGAATTTCTGAACCGTTTTAATGGAATCGTGGAATTTTCACATC TGACTAAGCAAGACTTAAGTCAAATTGTCGATTTGATGTTGGCGGATGTACAAAAAACGTTAGCCAAAAAATCCATCAAA CTTGAGGTAACTAAAGCGGCCAAAGATTGGCTGATGGAACAAGGCTATGATGAAGCAATGGGTGCGCGGCCATTACGGCG AGTAATTGAACAACAAATTCGTGACAAGGTAACGGATTTCTACCTTGACCACTTAGATGTCAAAAACTTGAAGGCTGATT TAGTGGATGCTGAGATTGTGATATCGGCAGCTTAG Protein sequence : MANFYGNDPFFNNDMDDVFNQLFRRMDNQNSERARYLVNGQSLTPDEFAQYRATGKLPQNNKTIEVSKDGKQAVKKGGIL EKLGTNLTEQARDGLLDPVIGRENEIQETAEILSRRTKNNPILVGDAGVGKTAVVEGLAQAIVAGKVPETIQDKEIYSID LSSLEAGTQYRGSFEENIKQLVKEVKAAGNIILFFDEIHQIIGTGATGGEDGGKGLADIIKPALSRGELTVIGATTQDEY RNTILKNAALARRFNDVVINEPTAADTLRILQGVKKLYEKHHHVVLPDDVLKAAVDYSIQYIPQRTLPDKAIDLIDMTAA HLAAKNSQTDVETLDQRVKKLEAAKEAAVKSEDFTKAADIKKSIEETKQKIKKTDQKEKIAATIDDVAQSVERLTGIPVA DMGANDIEHLKNLDKRLKSKVIGQDEAVEMVAKAIRRNRAGFSEGDQPIGSFLFVGPTGVGKTELAKQLALDMFGNKNAI IRLDMSEYADRTAVSKLIGTSAGYVGYEDNANTLTERVRRNPYSIVLLDEIEKADPQVLTLLLQVMDDGRLTDGQGNVIN FKNTIIIATSNAGFGNEALSGDKQRDQSLMDKLAPFFRPEFLNRFNGIVEFSHLTKQDLSQIVDLMLADVQKTLAKKSIK LEVTKAAKDWLMEQGYDEAMGARPLRRVIEQQIRDKVTDFYLDHLDVKNLKADLVDAEIVISAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-126 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpL | YP_003064448.1 | ATP-dependent Clp protease, ATP-binding subunit ClpL | VFG0080 | Protein | 3e-142 | 49 |
| clpL | YP_003064448.1 | ATP-dependent Clp protease, ATP-binding subunit ClpL | VFG0079 | Protein | 1e-128 | 45 |
