Gene Information

Name : bsh1 (JDM1_2822)
Accession : YP_003064405.1
Strain : Lactobacillus plantarum JDM1
Genome accession: NC_012984
Putative virulence/resistance : Virulence
Product : choloylglycine hydrolase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3049
EC number : -
Position : 3048717 - 3049691 bp
Length : 975 bp
Strand : -
Note : -

DNA sequence : 
ATGTGTACTGCCATAACTTATCAATCTTATAATAATTACTTCGGTAGAAATTTCGATTATGAAATTTCATACAATGAAAT
GGTTACGATTACGCCTAGAAAATATCCACTAGTATTTCGTAAGGTGGAGAACTTAGATCACCATTATGCAATAATTGGAA
TTACTGCTGATGTAGAAAGCTACCCACTTTACTACGATGCGATGAATGAAAAAGGATTGTGTATTGCGGGATTAAATTTT
GCAGGTTATGCTGATTATAAAAAATATGATGCTGATAAAGTTAATATCACACCATTTGAATTAATTCCTTGGTTATTGGG
ACAATTTTCAAGTGTTAGAGAAGTGAAAAAGAACATACAAAAACTAAACTTGGTTAATATTAATTTTAGTGAACAATTAC
CATTATCACCGCTACATTGGTTGGTTGCTGATAAACAGGAATCGATAGTTATTGAAAGTGTTAAAGAAGGACTAAAAATT
TACGACAATCCAGTAGGTGTGTTAACAAACAATCCTAATTTTGACTACCAATTATTTAATTTGAACAACTATCGTGCCTT
ATCAAATAGCACACCCCAAAATAGTTTTTCGGAAAAAGTGGATTTAGATAGTTATAGTAGAGGAATGGGCGGACTAGGAT
TACCTGGAGACTTGTCCTCAATGTCTAGATTTGTCAGAGCCGCTTTTACTAAATTAAACTCGTTGCCGATGCAGACAGAG
AGTGGCAGTGTTAGTCAGTTTTTCCATATACTAGGGTCTGTAGAACAACAAAAAGGGCTATGTGAAGTTACTGACGGAAA
GTACGAATATACAATCTATTCTTCTTGTTGTGATATGGACAAGGGAGTTTATTACTATAGAACTTATGACAATAGTCAAA
TTAACAGTGTCAGTTTAAACCATGAGCACTTGGATACGACTGAATTAATTTCTTATCCATTACGATCAGAAGCACAATAC
TATGCAGTTAACTAA

Protein sequence : 
MCTAITYQSYNNYFGRNFDYEISYNEMVTITPRKYPLVFRKVENLDHHYAIIGITADVESYPLYYDAMNEKGLCIAGLNF
AGYADYKKYDADKVNITPFELIPWLLGQFSSVREVKKNIQKLNLVNINFSEQLPLSPLHWLVADKQESIVIESVKEGLKI
YDNPVGVLTNNPNFDYQLFNLNNYRALSNSTPQNSFSEKVDLDSYSRGMGGLGLPGDLSSMSRFVRAAFTKLNSLPMQTE
SGSVSQFFHILGSVEQQKGLCEVTDGKYEYTIYSSCCDMDKGVYYYRTYDNSQINSVSLNHEHLDTTELISYPLRSEAQY
YAVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 3e-110 71
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 2e-110 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
bsh1 YP_003064405.1 choloylglycine hydrolase VFG2162 Protein 3e-114 69