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Name : dapE2 (JDM1_2292) Accession : YP_003063876.1 Strain : Lactobacillus plantarum JDM1 Genome accession: NC_012984 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : - Position : 2455197 - 2456450 bp Length : 1254 bp Strand : - Note : dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is simi DNA sequence : ATGGCAGAAACGGCACAGTTAGAAGCTGCTGTACAGGCATTAAGCGATATTGTAAAAATGAATACGGTAAATAACCATGA GCAATTGGTGGCGGATTATTTGGTCACACTTTTAAAGCAACATGGTATTGAAGCACAATCAATCGAGTACGCTCCCGGGC GGGTGAACTTGGTGGCCGAAATTGGTGATGGTCACGGTCCAGTCGTCGCGTTGGATGGTCATGAAGATACGGTGGCGTTG GGTGATGCAGATAAATGGCACACGGACCCGTTGGCAGCAACTATCAAAGATAATCGGTTGTATGGTCGCGGTGTGACGGA CATGAAGGCTGGACTAATGGCTGAAGTTTTCGCGATGATTGCATTGCACGATCAAGACGTCCCACTCCATGGCACGGTGC GGTTACTCGCAACTGTGGGAGAAGAAGTCGACCATTTAGGTGCTGAACAATTGACGGAACTCGGTTACGCCGATGATATT CAAACGTTGATCTGTGCGGAACCAAGCGGTGCGGACAAACAGCTTTTACTGACCAAGTCGATTCAAGCCATGTTAGGTGT TGACGACGATACGGCGCAACGGATGGCGGATGCGAATCCGACGACCGAACAACACTTCATCGAATTAGCGCATAAGGGTT CACTGACTTATACGATTAAAGCGCAAGGGGTGGCGGCCCACAGTTCGATGCCAGCGATTGGTCAAAACGCCATCGATATG TTGATGACTTACTATCAGAAACAAACCGCCTATTTTGACAGTTTCAAGACTATCGTTAATCCCGTATTGGGCCCAACCGT ACCTGTCGTGACGTTAATTAGTGGTGGCGAACAGGTCAACACCGTCCCAGCCAGTGCCGAAATGTCAGTAAAAATTCGGA CGATTCCAGAATTACGGAATGACCGCTTGATTAATGATTTGGAAGCCATCATTGCTGAATGCAATGCGGATGGTGCCAAT CTAACGATGGACATCGCAAGTTCGTTCTACCCAGTGCATACGCCGGAAGATAGCCAGTTGGTCCAGTTGGCGAAGAAGGT TGGGGAACAAGTCTTACAACAGCGGCTCCCGTACTTTGGTGCTCCTGGTGGGACGGACGCATCGTCTTATATTGTAAAGA GTCCTGATATGCAAGTGATCGTCTTCGGACCCGGCAATATTACAGCGCACCAAGTTAATGAATATGTTGATTTGGATATG TATGGGCGCTTCATCGAGATTTATCAAAAAATGATTACGGAATTGCTGGCTTAA Protein sequence : MAETAQLEAAVQALSDIVKMNTVNNHEQLVADYLVTLLKQHGIEAQSIEYAPGRVNLVAEIGDGHGPVVALDGHEDTVAL GDADKWHTDPLAATIKDNRLYGRGVTDMKAGLMAEVFAMIALHDQDVPLHGTVRLLATVGEEVDHLGAEQLTELGYADDI QTLICAEPSGADKQLLLTKSIQAMLGVDDDTAQRMADANPTTEQHFIELAHKGSLTYTIKAQGVAAHSSMPAIGQNAIDM LMTYYQKQTAYFDSFKTIVNPVLGPTVPVVTLISGGEQVNTVPASAEMSVKIRTIPELRNDRLINDLEAIIAECNADGAN LTMDIASSFYPVHTPEDSQLVQLAKKVGEQVLQQRLPYFGAPGGTDASSYIVKSPDMQVIVFGPGNITAHQVNEYVDLDM YGRFIEIYQKMITELLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 5e-67 | 41 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 2e-66 | 41 |
