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Name : JDM1_2227 (JDM1_2227) Accession : YP_003063811.1 Strain : Lactobacillus plantarum JDM1 Genome accession: NC_012984 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : - Position : 2374446 - 2375189 bp Length : 744 bp Strand : - Note : - DNA sequence : ATGGCAACGGATTATGTCATCGCCAAGCAGGTCAGCAAGCACTTTGGTCATCAGCAAGTGCTTAATCAGATGGATTTGAC ACTGCCGGCTGGAATGATTTATGGCTTGATTGGGCCATCAGGAGCTGGGAAGACCACCTTGATCAAGAGTATTTTAGGGA TGGAGGCTGTGGACAGTGGCACTGTTAAAGTCATGGATACGGTGATGCCCAATAGGGCGGTAATGGCACAAGTAGGGTAT ATGGCCCAAAGTGACGCTTTGTATGAGACACTAACGGCCCGTGAAAACCTGACCTTTTTTGGGCAATTAATGAGTGTTCC AAAAATAAAGTTAGCACAGATGATTGATTATGCAGCCGGATTAGTTGATTTAGCGTCCCAATTAGACAAGCGGGTCAGTG GCTATTCGGGTGGGATGAAACGGCGCTTGTCGTTGGCAATTGCCCTGATTCAGGATCCCCAATTATTGATTTTAGATGAA CCGACCGTTGGGATTGATCCAGAATTACGGCAACAAATTTGGACCGAACTAAATAAACTCAAGGATACCGGTAAGTCGAT GCTCGTGACAACGCATGTCATGGACGAAGCAGAACGGTGTGATTATCTCATGTTGATTCGGCACGGGATTGAGCTTGCTG AGGGGACACCCGCGGCACTGAAACAACAGTATGCAGTAGATACGATCGAACAGGTCTTTTTGAAAGCGGGGCGGATGCAA GATGCGAACGATGGCAATCGTTAG Protein sequence : MATDYVIAKQVSKHFGHQQVLNQMDLTLPAGMIYGLIGPSGAGKTTLIKSILGMEAVDSGTVKVMDTVMPNRAVMAQVGY MAQSDALYETLTARENLTFFGQLMSVPKIKLAQMIDYAAGLVDLASQLDKRVSGYSGGMKRRLSLAIALIQDPQLLILDE PTVGIDPELRQQIWTELNKLKDTGKSMLVTTHVMDEAERCDYLMLIRHGIELAEGTPAALKQQYAVDTIEQVFLKAGRMQ DANDGNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0081 | YP_251996.1 | hypothetical protein | Not tested | SCCmec | Protein | 3e-52 | 58 |
| SE0094 | NP_763649.1 | ABC transporter ecsA-like protein | Not tested | SCCpbp4 | Protein | 2e-65 | 57 |
| SH2613 | YP_254528.1 | hypothetical protein | Not tested | ¥ðSh2 | Protein | 7e-64 | 55 |
