Gene Information

Name : JDM1_1965 (JDM1_1965)
Accession : YP_003063549.1
Strain : Lactobacillus plantarum JDM1
Genome accession: NC_012984
Putative virulence/resistance : Unknown
Product : amino acid ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1464
EC number : -
Position : 2091581 - 2092405 bp
Length : 825 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAAAAGGGAATTCTAGGATTATTAGCAGTTGCGGCAACGGCAATTTTGTTAGTCGGTTGTGGGAAGTCATCGTC
AACAAAGACAACAACCATTACTGTAGGGGCTTCTTCAGTGCCACACGCACAAATCTTGAAGCACGTGCAGCCAGAATTGA
AAAAGGAAGGCGTTAACTTGAAGATCAAAGTCTTTCAAGATTACGTCTTACCTAATAAGGCATTGGCTTCGAAAGAATTA
GATGCCAACTACTTCCAACACATCCCATTCTTGGATAACTGGAATAAGGAAAATAATGGGAGCCTCGTATCAGCGGGGAA
GGTTCACTTGGAACCAATCGGTGTTTATTCCAAGAAAGTTAAGAGTCTAAAAGACTTGAAAGACGGCGCAACCGTTCTGG
TCAGCAGCAACGTGGCTGACTATGGTCGGGTCCTGACGTTATTTAAGGATGCGGGTTTAATTACTTTGAAAAAAGGGACA
GATTTAACTTCAGCAACTTTTAATGACATTAAGACCAACAAACGTCATTTGAAGTTTAAACATTCATACGAAGCTAAGTT
AATGCCAACATTCTACAAAAATAACGAGGGTGACGCGGTCGTTATTAACGCGAACTACGCGGTTCAAGCTGGGTTGAATC
CTAAGAAGGATGCGATTGCACTTGAAAAATCAGATTCACCATATGCCAACATTGTGGCTGTTCGTAAGGGTGATAAGAAC
AAGCCAGCTATTAAGAAACTAATGAAAGCTTTACGTTCTAAGAGCACCCAGAAATGGATTGAAAAGAAGTACAAGGGTGC
CATCCTGCCAGTTTCGGCCGACTAA

Protein sequence :
MKKKGILGLLAVAATAILLVGCGKSSSTKTTTITVGASSVPHAQILKHVQPELKKEGVNLKIKVFQDYVLPNKALASKEL
DANYFQHIPFLDNWNKENNGSLVSAGKVHLEPIGVYSKKVKSLKDLKDGATVLVSSNVADYGRVLTLFKDAGLITLKKGT
DLTSATFNDIKTNKRHLKFKHSYEAKLMPTFYKNNEGDAVVINANYAVQAGLNPKKDAIALEKSDSPYANIVAVRKGDKN
KPAIKKLMKALRSKSTQKWIEKKYKGAILPVSAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAAV_0786 YP_003281709.1 ABC transporter substrate-binding protein Not tested SaPIAv Protein 3e-44 51