|
Name : queA (JDM1_1915) Accession : YP_003063499.1 Strain : Lactobacillus plantarum JDM1 Genome accession: NC_012984 Putative virulence/resistance : Unknown Product : S-adenosylmethionine:tRNA ribosyltransferase-isomerase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0809 EC number : - Position : 2029587 - 2030621 bp Length : 1035 bp Strand : - Note : Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step DNA sequence : ATGAGTTTAACACTTGAAGATTTTGATTATGATTTACCACATGAACTGATTGCCCAGACACCAATCAAAAAACGGGATAG TTCACGGTTGTTGGAATTGGATCGCCAAACGGGCGAAATGCAAGATAAGCATTTCTACGATATTATTGATCAACTCAATC CAGGCGATGCGGTCGTTATGAATAATTCCCGCGTTATGCCAGCTCGTTTGTATGGTGTTAAACCTGAAACTGGTGGTCAC GCTGAAGTCCTATTATTGCATAATACGGAAGGTGATGAATGGGAGACACTCATGAAACCTGCCAAACGTGCCAAGGTCGG TACCGTGATTTCATTTGGCGATGGTAAGTTGACGGCGACCGTAACGGCCGAAAAGGAAGATGGCATTCGAATGATCGAGT TCCATTACGATGGGATCTTCATGGAAATTTTGGAGAGCCTGGGTGAAACGCCATTGCCACCATATATTAAAGAAAAACTC GATGATCCAGACCGTTATCAGACTGTTTATGCCAAGGAAAATGGCTCGGCAGCTGCGCCAACAGCTGGTTTACACTGGAC GAAGGAACTCTTACAAAAAGTTCAAGACAAGGGTATTAAGTTGGTTTACTTGACGCTGCATGTCGGACTAGGGACGTTCC GGCCAGTTGAAGAAGATAATATCGATGATCATAAGATGCACAGTGAATTTTATCGATTGGACGAAGATGCTGCTAAGACG TTGAATGAAGTACGGCAAAATGGTGGGCGCATCATTGCAACCGGGACAACGTCAATCCGGACGTTAGAGACCATTGGTAG TAAGTTTGATGGTGAAATCAAGCCGGATTCGGGTTGGACGGATATCTTTATCAAACCTGGTTATCAATGGAAAGTCGTTG ATGCGTTCATCACGAACTTTCATTTACCGAAGTCGACCTTGGTCATGTTAGTGGCTGCCTTTACGGGCCGTGATATGATT TTGAAGGCTTATCAACATGCGATTGATGAAAAGTATCGCTTCTTCAGTTTTGGCGATGCGATGTTTATTCACTAG Protein sequence : MSLTLEDFDYDLPHELIAQTPIKKRDSSRLLELDRQTGEMQDKHFYDIIDQLNPGDAVVMNNSRVMPARLYGVKPETGGH AEVLLLHNTEGDEWETLMKPAKRAKVGTVISFGDGKLTATVTAEKEDGIRMIEFHYDGIFMEILESLGETPLPPYIKEKL DDPDRYQTVYAKENGSAAAPTAGLHWTKELLQKVQDKGIKLVYLTLHVGLGTFRPVEEDNIDDHKMHSEFYRLDEDAAKT LNEVRQNGGRIIATGTTSIRTLETIGSKFDGEIKPDSGWTDIFIKPGYQWKVVDAFITNFHLPKSTLVMLVAAFTGRDMI LKAYQHAIDEKYRFFSFGDAMFIH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 5e-68 | 45 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 2e-64 | 45 |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 2e-64 | 45 |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 2e-64 | 45 |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 8e-65 | 45 |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 8e-65 | 45 |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 8e-68 | 45 |
