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Name : pdhD (JDM1_1802) Accession : YP_003063386.1 Strain : Lactobacillus plantarum JDM1 Genome accession: NC_012984 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 1911121 - 1912533 bp Length : 1413 bp Strand : - Note : E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGGTTGTAGGAGATTTTGCTGAAGAACGCGATACAATGATCATCGGCGCGGGCCCTGGGGGTTACGTCGCTGCGATTCG GGCCGCGGAACTCGGCCAAAAAGTCACCGTGGTGGAAAAGGAATATATCGGTGGTGTCTGCCTTAACGTTGGTTGTATTC CATCAAAAGCTTTGATCAGTGCTGGTCATCGGCTACAAGAAGCCAAGGACAGTAAGATCTTTGGTATTAAAAATATTCAG GATCCGGTGTTGGATTTTAAAGTGACCCAGGACTGGAAAGACCATCAAGTTGTTGATCGGTTGACTGGTGGCGTTGAAAT GCTGCTCAAGAAGCATAAGGTGGAAGTGGTCCGTGGGGAAGCCTATATGCATGATAATCATACCTTACGGGTGATGAATG GTGACCATACTGGTCAGACTTATAAATTCAAACATTTGATCATCGCAACTGGTTCACGGCCAGTTGAAATTCCGGGCTTC AAGTTCAGTGGTCGGGTCGTTGACTCGACGGGTGGCTTGAATTTGCCCGAAGTGCCTAAAGAATTAGTGGTTATCGGTGG TGGGTACATTGGTTCTGAGTTGGCTGGTGCCTATGCCAACCTCGGTGCTCACGTGACGATTCTTGAAGGGACACCGCAAA TCTTACCTAACTTCGAAAAAGATATGGTCAAGCTTGTCTTGAACAGCTTTAAGAAGAAGGGGGTTGATGTCATTACTAAT GCGATGGCTAAAAACTCCGAACAAGATGATAGTGGCGTTACGGTTACCTACGCTGTCGACGGGAAAGAAACTGAGATTCA TGCTGACTATGTTATGGTCACAGTTGGTCGGCGGCCTAATACTGACGACATGGGCTTGGAATACACTGACGTCAAGCTAA CGAAGCGCGGCTTGATCGAAGTTGATGAACAGGGGCGGACGGCCGCTGAGGATATCTTCGCAATCGGAGATATTGTCGCC GGTGCTGCGCTGGCACACAAAGCTTTTGCTGAAGCCAAAGTTGCTGCTGGTGCAATCAGTGGCAAGAAGACGGCGAACGA CTACGTTTCAATTCCGGCAGTTTGCTTTACTGATCCAGAATTGGCAACAGTTGGCATGACGAAGGCTGAAGCTGAAGAAG CCGGCTTGCAGGTGAAGACGTCGAAGTTCCCATTTGCTGGTAATGGTCGTGCAATCTCGTTGAACGCCATGGACGGCTTC TTCCGTCTTGTCAGTACGAAGGACGAAGGCACCATTGTCGGCGCCCAAATTGCCGGACCAGGTGCCAGTGATTTGATTTC TGAATTAAGCGTTGCGGTCAATGGTGGGATGAATGTCGAAGACCTTGCTTTGACGATTCATCCACACCCGACCCTAGGTG AAGTAGTTCAAGAAGCGGCGGATGAAGCGATGGGTTACCCAACGCACATCTAA Protein sequence : MVVGDFAEERDTMIIGAGPGGYVAAIRAAELGQKVTVVEKEYIGGVCLNVGCIPSKALISAGHRLQEAKDSKIFGIKNIQ DPVLDFKVTQDWKDHQVVDRLTGGVEMLLKKHKVEVVRGEAYMHDNHTLRVMNGDHTGQTYKFKHLIIATGSRPVEIPGF KFSGRVVDSTGGLNLPEVPKELVVIGGGYIGSELAGAYANLGAHVTILEGTPQILPNFEKDMVKLVLNSFKKKGVDVITN AMAKNSEQDDSGVTVTYAVDGKETEIHADYVMVTVGRRPNTDDMGLEYTDVKLTKRGLIEVDEQGRTAAEDIFAIGDIVA GAALAHKAFAEAKVAAGAISGKKTANDYVSIPAVCFTDPELATVGMTKAEAEEAGLQVKTSKFPFAGNGRAISLNAMDGF FRLVSTKDEGTIVGAQIAGPGASDLISELSVAVNGGMNVEDLALTIHPHPTLGEVVQEAADEAMGYPTHI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 1e-90 | 47 |
