|
Name : agl2 (JDM1_0178) Accession : YP_003061764.1 Strain : Lactobacillus plantarum JDM1 Genome accession: NC_012984 Putative virulence/resistance : Unknown Product : alpha-glucosidase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 187398 - 189074 bp Length : 1677 bp Strand : + Note : - DNA sequence : ATGGCAGCAACAATCAAGTGGTGGCAACAAGCCGTTGTCTATCAGGTCTATCCACGGAGTTTTCAAGATACCAATCATGA TGGTATTGGTGACTTAAAGGGGATCACGGCCCACCTAGACTACTTAAAGCAATTAGGAATCGACGTCATTTGGCTCAATC CCATTTATCGTTCACCCAACGATGATAATGGTTATGATATTAGTGATTATCAACAAATTGCGGCCGACTTTGGCACTATG GCTGATTTTGATGAATTATTGCAAGCCGCCCATGACCGGGGCTTAAAGCTCATCATGGACTTGGTTGTTAACCATACCTC TGATGAGCATCCATGGTTCAAACGCAGTCGCCAGGACCGCACCAATCAATATCGTGATTTCTACTTTTGGCGCTCAGGTA ACGGCAAAAAGGCGCCCAATAATTGGGATGCGGCTTTTGGTGGTTCAGCATGGCAATATGATGAGCAGACCCAGCAGTAT TATTTACACACGTTTTCAACAAAACAACCTGATTTAAACTGGGAGAATCCGACCTTACGAGAGTCAGTTTATACGATGAT GACCTGGTGGCTGAACAAGGGTGTTGACGGTTTTCGAATGGACGTCATTAACCAAATCTCTAAGTTACCCGGGTTACCAA ATGGTCCACTGAAACCGCACAGTCAGTTTGGCGATGCTCGAGTAACGAACGGACCGCGAGTTCATGAATTCTTGCAAGAA ATGAACCAAGAAGTGTTGTCACAGTTTGATATCATGACGGTTGGTGAGACCCACGGGGTGACACCAGCGGATGCGCTGAA GTATGCGGGCGCTGATCGGCACGAATTAGATATGGTCTTTGAATTTCAACATCTGCGACTTGATAATAGTCAGCATGGTC TTGGTAAGTGGAGTACGCGTAAGACACCGTTAGTGGCGCTAAAGAAAGTCATTAGTGACTGGCAAGTCGGACTTGAAGGG CGGGCTTGGAACAGCCTGTTTTGGAACAATCATGATACGCCACGAGCGGTCTCACGTTTTGGTGATGACCGACCAGCATA TCGGGTACGTTCGGCTAAAATGCTCGCAACGTGTTTACACCTCTTGCAGGGAACCCCGTATATTTATCAAGGTGAGGAAC TGGGGATGACTGACGCTCATTTTACTGAACTAGCCAGTTACCGAGATATTGAATCGCTCAATGCCTATCGTGATTTAGTG ACTGAGCGCCAGCTGCTATCACCGGCAGACATGATGGCCCGATTAGCGGCGCGTTCTCGGGACAACTCGCGAACGCCGAT GCAATGGGACACGGAGGTTAACGCGGGTTTTAGTGACGCGGCGCCATGGCTCACGGTCAATCCCAACTATCGTCAAATCA ATGCTGCCGCAGCTTTGGCTGATCTGGATTCAGTGTGGTACTATTACCAGCACTTGATTCAATTACGACATCAATACCCC TTAGTGACGTTAGGTTCGTTTGAGCTCTTGTGGGCCGATGATCCGCAGGTATTCTTATATGAACGGCAATGGGAAGGGCG GACCTGGCTAGTTTGTTGCAATTTCACAGCCGAGACACTGTCCCGACCACTGGATCAATATCTGACGCCCACGGCCAAAT GCTTGATTAGTAATTATGGCGAGCAGCAGCCAAATAAATTACGGCCTTATGAGGCTTGGGTCTACCAACTCGCATAG Protein sequence : MAATIKWWQQAVVYQVYPRSFQDTNHDGIGDLKGITAHLDYLKQLGIDVIWLNPIYRSPNDDNGYDISDYQQIAADFGTM ADFDELLQAAHDRGLKLIMDLVVNHTSDEHPWFKRSRQDRTNQYRDFYFWRSGNGKKAPNNWDAAFGGSAWQYDEQTQQY YLHTFSTKQPDLNWENPTLRESVYTMMTWWLNKGVDGFRMDVINQISKLPGLPNGPLKPHSQFGDARVTNGPRVHEFLQE MNQEVLSQFDIMTVGETHGVTPADALKYAGADRHELDMVFEFQHLRLDNSQHGLGKWSTRKTPLVALKKVISDWQVGLEG RAWNSLFWNNHDTPRAVSRFGDDRPAYRVRSAKMLATCLHLLQGTPYIYQGEELGMTDAHFTELASYRDIESLNAYRDLV TERQLLSPADMMARLAARSRDNSRTPMQWDTEVNAGFSDAAPWLTVNPNYRQINAAAALADLDSVWYYYQHLIQLRHQYP LVTLGSFELLWADDPQVFLYERQWEGRTWLVCCNFTAETLSRPLDQYLTPTAKCLISNYGEQQPNKLRPYEAWVYQLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-152 | 56 |
