Gene Information

Name : JDM1_1472 (JDM1_1472)
Accession : YP_003063056.1
Strain : Lactobacillus plantarum JDM1
Genome accession: NC_012984
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 1566533 - 1567486 bp
Length : 954 bp
Strand : -
Note : -

DNA sequence : 
GTGGTTGCCATTAAGCTACACGAATTATCCAAAAGTTTTCAAGGTCCGGTAATCAATCAACTCAGTCTGACGATTCCTGA
TCAACAAATCACGGCATTAATTGGCCCGTCCGGTTCCGGCAAATCAACGCTCTTAAACATGATTGCGGGTCTCACGACAC
CTGACAGTGGTCAAATTTCATTTGATAATCAGCCCATTTTTGACGCCGCGACCCATTGGAATCAGCCCCCTGCCCAGCGG
CACTTGGCGATGGTTTTTCAAGACTTTGCCCTGTGGCCGCACATGACGGTCCAAGAAAATGTCGCTTTCGCTTTAGAAAA
GCATCTGACCAAGCCGGAATTGACTGCTCAAGTCAACTGGGCCCTCGAACAAGTTAGTCTGATTGACTTCCGACATCGTT
ATCCACGTGAACTTTCGGGCGGGCAACAGCAACGGGTCGCCCTTGCACGGGCACTAGCGACCCAACCGGATTTGATTTTA
TTCGACGAAGCTTTAAGTGCGCTTGACCCCGAACTGCGCACACGGCTTCAATTAGAAATTCGCGCCCTGATTCACGACCA
GCATCTGACGGCCATCTTTGTAACTCACGACCGTCCAGAAGCCTTGCAAGTTGCCGACCACCTCGTATTACTGCAAGGGG
GCAACGTGGTGCAGACGGGCACACCAGCACAGCTGTACCAACAGCCAAAATCTCAATTTGTCGCCAATTTTATGGGCACC
CTTAATCAGATCAACGCGCACCAGGCCATTCGCCCGGAATATGTCGCAGTCAGTCAAACGGGTACTCAGCAGCCCACTTA
CCAAGGCTTGGTGCAGCGTTCAACCTTTATGGGCGATCATTTTGATACTTACGTTCAAGTCGGCGCCTATGATTGGCACG
TCAAGACCCAGCTACCCTATACCACTGCACCGATCACATTAAGCATCGATCCACATCAAATACTAACTTTTTAG

Protein sequence : 
MVAIKLHELSKSFQGPVINQLSLTIPDQQITALIGPSGSGKSTLLNMIAGLTTPDSGQISFDNQPIFDAATHWNQPPAQR
HLAMVFQDFALWPHMTVQENVAFALEKHLTKPELTAQVNWALEQVSLIDFRHRYPRELSGGQQQRVALARALATQPDLIL
FDEALSALDPELRTRLQLEIRALIHDQHLTAIFVTHDRPEALQVADHLVLLQGGNVVQTGTPAQLYQQPKSQFVANFMGT
LNQINAHQAIRPEYVAVSQTGTQQPTYQGLVQRSTFMGDHFDTYVQVGAYDWHVKTQLPYTTAPITLSIDPHQILTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-27 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-27 41