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Name : recG (JDM1_1367) Accession : YP_003062951.1 Strain : Lactobacillus plantarum JDM1 Genome accession: NC_012984 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1458947 - 1460986 bp Length : 2040 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGGGACAACAGTTGAGTGACGCGGTTGCAACTTTAAGTGGTGTCGGCCCAGCCCGCCAAAAAGGTTTAGCGGAGCTTGG GATTAATACGATTGCAGATCTATTGACCTATTATCCCTTTCGCTATGAAGATCTACAGGTCAAAGACGTCAATGAAATCG CCGATCAAGAAAAGGTGACACTAAAGGGTACTGTGGCTTCTGAACCTGTGCTAGCACGGTTTGGCCGTAAGAAGAATCGC CTGAATTTTCGCTTGTTAATCGACCATGACGTCTATATGGTGACTTTTTTTAATCAACCATACTTGATGAAACAGATTGA GACTGGCCAAGATTTAGCCGTTTATGGCAAGTGGGACGCCACGCGCAGTAGCTTGACGGGAATGAAGATCATCAATCCCA ATAATGCGGATTCAGCGTTTGGTTCGATTTATCCGGCCAGCAAGACGGTCAAGCAGGGGACGATTCAGAAGATGATCAAA CAAGCATATGAGTTATATGCCCCAGTCATTACGGACATTGTGCCTGCTAACTTACGTGCTAAATACCGACTGTTACCGCG GCGCCAAATGATTCATGATATGCACTTCCCAGCTAGTCAAGCCGATTCAACGGCCGCTCGACGCTCAGCGACCTACGAGG AGTTCTTGTTGTTTCAAATGCAAATGCAAGTTCTGAAGCAAACGGACGCGACGACGAACGGTATTGCGATCGCTTATGAC AATGACCGACTAAAGGCGTTTATTAAAACACTGCCATTTGAATTGACCCACGCCCAAAAACGTGTCGTCAATGAAATTTG TTTGGATTTGAAGTCACCGAAGCATATGAATCGGTTGCTTCAAGGTGACGTGGGGTCCGGGAAAACGATTGTGGCTGCCA TTGTCATGTATGCGGCGATTACCGCTGGTTATCAGGCCGCGTTGATGGCGCCAACCGAAATTTTGGCTGAACAACACGCA AATAACTTGGCCCAGGTCTTTGCCGACACGGATGTCAACGTCGCACTGTTAACGGGTGCGACCAAGCCAGCTGCCCGCAA GACATTGTTAGCAGCGCTGGCTGCTGGTGAGATCAACTTATTGATTGGCACGCACGCCCTGATCCAGGACGGGGTGACTT ATGCTAATTTGGGATTAGTTATTACCGATGAGCAACATCGCTTTGGGGTTAACCAACGGGCCGCCTTTCGTCAAAAAGGC GGGCAACCTGATGCACTAGCCATGACGGCAACACCAATTCCAAGGACATTGGCGATTACGGCGTATGGTGAAATGGACGT TTCTGAAATTGATGAATTACCGGCTGGTCGGCAACCGATTCAAACCACTTGGGTACGGAGCAACCAAGCTAATTCGGCGC TAAGCTTTGTTCATCAACAGATTGACAATGGATCGCAAGCCTATGTGGTGACACCGTTGATTGAGGAATCCGAGACGCTG GATGTCAAAAACGCTGAGGCTCTGTCAGCTAATTTACAAGAGTATTTTGGGGCGAGTGTTAAAGTTGGACTGTTACACGG TCGAATGAAACCTGAGGAAAAAGATGCGGTCATGGCGGCTTTTAAGGCGGGAGACATTCAGTTACTTGTTTCCACGACCG TGATTGAAGTGGGGGTTGACGTCAAGAATGCCACAATCATGATGATTTATGACGCTGACCGTTTTGGCTTGGCGCAACTA CATCAATTACGCGGACGCGTCGGTCGTGGGACCAAGGCTTCATACTGTATTTTGGTGGCTGATCCCAAGAACCAGCAAGG GATTGAGCGGATGCAGATCATGACGCAGACAACAAATGGTTTTGTTTTGGCACAAAAAGACTTAGAATTACGAGGAGCCG GTGATGTGCTGGGGGTCAAGCAATCGGGAATGCCGGAATTTAAAGTGGGTGATCCGATTGCGGATTTGACCGTGCTACAA GTTGCCCAGCAAGATGCCCACGCAATCGTGCAGCAACCGGATTGGCAAAGTCAACCGGATAATCGGGCACTAGCCGCCTA TTTGAGCCAGAAGTTGGCTGCGGTGGGGACGCTCGATTAA Protein sequence : MGQQLSDAVATLSGVGPARQKGLAELGINTIADLLTYYPFRYEDLQVKDVNEIADQEKVTLKGTVASEPVLARFGRKKNR LNFRLLIDHDVYMVTFFNQPYLMKQIETGQDLAVYGKWDATRSSLTGMKIINPNNADSAFGSIYPASKTVKQGTIQKMIK QAYELYAPVITDIVPANLRAKYRLLPRRQMIHDMHFPASQADSTAARRSATYEEFLLFQMQMQVLKQTDATTNGIAIAYD NDRLKAFIKTLPFELTHAQKRVVNEICLDLKSPKHMNRLLQGDVGSGKTIVAAIVMYAAITAGYQAALMAPTEILAEQHA NNLAQVFADTDVNVALLTGATKPAARKTLLAALAAGEINLLIGTHALIQDGVTYANLGLVITDEQHRFGVNQRAAFRQKG GQPDALAMTATPIPRTLAITAYGEMDVSEIDELPAGRQPIQTTWVRSNQANSALSFVHQQIDNGSQAYVVTPLIEESETL DVKNAEALSANLQEYFGASVKVGLLHGRMKPEEKDAVMAAFKAGDIQLLVSTTVIEVGVDVKNATIMMIYDADRFGLAQL HQLRGRVGRGTKASYCILVADPKNQQGIERMQIMTQTTNGFVLAQKDLELRGAGDVLGVKQSGMPEFKVGDPIADLTVLQ VAQQDAHAIVQQPDWQSQPDNRALAAYLSQKLAAVGTLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 3e-93 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| recG | YP_003062951.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 2e-101 | 42 |
