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Name : clpE (JDM1_1074) Accession : YP_003062658.1 Strain : Lactobacillus plantarum JDM1 Genome accession: NC_012984 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpE Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1140024 - 1142243 bp Length : 2220 bp Strand : - Note : - DNA sequence : ATGCTTTGTGACAATTGCCATAAGAACGAAGCGACGATCCATTTATATACGAGCGTCAACGGTCAGCGGCGACAAATCAA CCTTTGTCAAAATTGCTATCAACTGCTAAAGAATCAGGAACAGCAACCAAATAACGGAGTTGGAGGTGCTGATATGGCAC AAGATCCATTCGGTTTTGGTGGTCTTGACGACATTTTCCGTGCAATGCAGGGTGGCGTTGATCCTAATAACGCTTACCGG CAACAACAGACCCCACCGACCCAGCCAGCTGGTCCTAATGGCGGCAATCGTCGTGGCAATAACAACGGCGGTGGCCTCCT TGGCCAATACGGCTTCAACTTAACAGCGCAAGCTAAACAGGGCAAAATCGATCCAGTGATTGGTCGCGATACCGAAATTA ATCGGGTTATCGAGATTTTGAATCGCCGGACCAAGAATAACCCCGTTTTAATTGGTGAAGCTGGGGTTGGTAAAACGGCG GTCGTGGAAGGACTAGCACAGAAAATCGTTTCTGGTCAAGTTCCACAAAAACTGTTAGATAAAGAAATTATTCGTTTGGA CGTGGCTTCCCTTGTTCAAGGTACCGGTATTCGAGGTCAATTTGAACAACGAATGCAACAATTAATGAAGGAAGTTCAAA GCAATCCGAATATCATCCTCTTCATTGACGAAATCCATGAAATCATGGGTGCCGGTAATGCTGAAGGTGGTATGGATGCT GGGAACGTTCTGAAACCCGCCCTTGCCCGTGGTGATTTCCAATTAGTTGGGGCCACGACATTAAACGAATACCGCGACAT CGAAAAGGATGCCGCCCTCGCCCGCCGGTTCCAACCGGTCACGGTCAACGAACCGAGCGTGGAAGAATCTATCAAGATTC TCGAAGGCATTCAGAAGAAGTACGAAGACTATCATCACGTTAAATACGATCAAGATGCCATTGTGGCAGCCGTCAAGTTG TCAAATCGTTACATTCAAGATCGTTTCTTACCTGATAAGGCCATCGATTTACTCGATGAAGCTGGTTCACGTAAGAACTT GACGTTGAAGACGGTCGATCCAAAGACGATTCAAGAAAAGATCGACGAGGCAGAAAAGCAGAAACAGGACGCCTTGAAGA AGGAAGACTACGAAAAAGCCGCCTACTATCGCGATCAAGTTGCTAAGTTAGAAAAAGCTAAGCCCGATGAAAGTTCAGAC CAGCCTAATAACGATACTGCCACTGTAACAGTCAAGGACATGGAACAAATTGTCGAAGAAAAGACAAGTATTCCAGTTGG TGACTTGCAGGCTAAGGAACAGGCTCAAATGAAGACCTTAGCACCCGACCTTAAGAGTACGGTTATTGGTCAAGACCAAG CGGTTGAAGCAGTTGCCCGGGCCATCCGGCGTAATCGAATCGGTCTGAACGGAACTGGCCGGCCAATTGGTTCCTTCATG TTTGTTGGCCCAACCGGGGTTGGTAAAACTGAATTAGCTAAACAACTTGCTAAGGAACTGTTTGGTTCCCAAGACGCCAT GATTCGGTTTGACATGAGTGAATACATGGAACCACATTCAGTGGCTAAGTTGATCGGTTCACCGCCTGGCTATGTTGGCT ATGAAGAAGCCGGTCAGTTAACTGAACAGGTTCGTCGTCATCCATATAGCCTAGTCTTACTAGACGAAGTTGAAAAGGCT CATCCGGATGTCATGCACATGTTTTTGCAAATCCTCGATGATGGCCGGCTGACCGACTCACAAGGTCGGACTGTCAGCTT CAAGGATACGATCATCATCATGACTTCCAACGCTGGGACTGGCGACAGTGAAGCTAATGTCGGTTTTGGTGCCGCTGCTG AAGGCAAGACGCACGATATCACTAGCCGGTTGACGGACTACTTCAAGCCAGAATTCTTAAACCGGTTCGATGACATCATT CAATTCAACGCTTTATCTAAGGAAAACTTGATGAAAATTGTTGGTTTGATGATCGAAGATGTCAACGGCATGTTAGCTAA CCAAGGCTTACACGTCCACGTCACAGAACCTGTCGAGGAAAAACTCGTTGAACTAGGTTACAACCCTCAGATGGGGGCTC GCCCACTCCGGCGTGTTATCCAGGAACAAATCGAAGATCGCATCGCCGATTTCTATTTGGACCACGGCGACGTTAAGAAC ATGGTTGCAAAAGTTGAAGACGGCAAGATTGTTTTGGCGGCTGAGACGAAGTCCGAATAA Protein sequence : MLCDNCHKNEATIHLYTSVNGQRRQINLCQNCYQLLKNQEQQPNNGVGGADMAQDPFGFGGLDDIFRAMQGGVDPNNAYR QQQTPPTQPAGPNGGNRRGNNNGGGLLGQYGFNLTAQAKQGKIDPVIGRDTEINRVIEILNRRTKNNPVLIGEAGVGKTA VVEGLAQKIVSGQVPQKLLDKEIIRLDVASLVQGTGIRGQFEQRMQQLMKEVQSNPNIILFIDEIHEIMGAGNAEGGMDA GNVLKPALARGDFQLVGATTLNEYRDIEKDAALARRFQPVTVNEPSVEESIKILEGIQKKYEDYHHVKYDQDAIVAAVKL SNRYIQDRFLPDKAIDLLDEAGSRKNLTLKTVDPKTIQEKIDEAEKQKQDALKKEDYEKAAYYRDQVAKLEKAKPDESSD QPNNDTATVTVKDMEQIVEEKTSIPVGDLQAKEQAQMKTLAPDLKSTVIGQDQAVEAVARAIRRNRIGLNGTGRPIGSFM FVGPTGVGKTELAKQLAKELFGSQDAMIRFDMSEYMEPHSVAKLIGSPPGYVGYEEAGQLTEQVRRHPYSLVLLDEVEKA HPDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGTGDSEANVGFGAAAEGKTHDITSRLTDYFKPEFLNRFDDII QFNALSKENLMKIVGLMIEDVNGMLANQGLHVHVTEPVEEKLVELGYNPQMGARPLRRVIQEQIEDRIADFYLDHGDVKN MVAKVEDGKIVLAAETKSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-151 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_003062658.1 | ATP-dependent Clp protease, ATP-binding subunit ClpE | VFG0080 | Protein | 0.0 | 59 |
| clpE | YP_003062658.1 | ATP-dependent Clp protease, ATP-binding subunit ClpE | VFG0079 | Protein | 6e-156 | 51 |
