Gene Information

Name : Hbal_0625 (Hbal_0625)
Accession : YP_003059024.1
Strain : Hirschia baltica ATCC 59814
Genome accession: NC_012982
Putative virulence/resistance : Unknown
Product : DEAD/DEAH box helicase
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 660273 - 662342 bp
Length : 2070 bp
Strand : +
Note : SMART: DEAD-like helicase; KEGG: pap:PSPA7_5332 Sea12

DNA sequence :
ATGGTGTGTAATAATTCTGTACCCTCCGTTTCCGTAAACTATGCACAAAATGGTAGCTCCAAAAAGTCCAATGAATTGGG
TATGCGCCCAATGCAGGAACAGGCATTTGAAAAACGTGGTGAGCAATACCTTCTTATCAAATCTCCACCTGCTTCTGGTA
AAAGCCGTGCGCTTATGTTTGTCGCGTTGGACAAGCTACACAATCAAGGTGTGAAACAAGCGCTTATTGTGGTGCCTGAA
AAATCTATTGGCTCTAGTTTCAATGATGAGCCTTTGAGCAAATTTGGCTTTTGGGCAGATTGGGAAGTCGAGCCTCAATG
GAATTTGTGTAATGCGCCAGGAGGTGACGATGGTAAGGTTGGAGCCGTTGGAAAATTCTTAGATAGTGACTCGAAAATAT
TGGTGTGTACGCACGCTACATTTCGGTTTGCGGTCGACCGTTTGGGCGTTGAAGCATTTGATGATCGTTTGATTGCTGTT
GATGAGTTTCATCATGTTTCCGCCAATCCAGACAATAAGCTTGGTGCGCACTTAATTGATTTTATGGCGCGCGATAAAGT
GCATATTGTTGCTATGACTGGTTCTTATTTTCGCGGTGATGCAGATGCTGTTTTATTGCCAGAAGATGAAGCCAAGTTTG
AGAAGGTCGTCTATACTTATTACGAGCAATTGAATGGCTATGAGTATCTCAAAAGTTTAGATATCGGTTATTTTTTCTAT
TCTGATGCCTATGCTGATGACATCATGAAAGTGTTGGATCCGAATGAAAAGACAATCATTCATATTCCAAGCGTTAATTC
CCGAGAAAGTACCAAGCTTGGTAAAAATATTGAGGTTGATCATATTCTCGATGCACTCGCTGGCGGAAAAGAGGGCAGTT
GGAAGGGCATCGACCCAGAGACAGGCTTTCATCTAGTTGAGGCTGAAAATGGAAAGTTGCTGCGGATAGCGGATTTAGTA
GAAGATGACCCAGCAAAGCGAGACAAAGTATCGGCGTCTCTGAAGGACCCCGCTGAAAAGAATAATCGCGATCATGTCGA
TATAATTATTGCGCTAGGCATGGCTAAGGAAGGGTTTGACTGGATTTGGTGTGAACATGCTCTCACCATTGGTTATCGTT
CAAGTTTAACCGAAATCGTGCAAATTATTGGGCGCGCAACCCGTGATGCTAAAGGTAAAACCAAAGCCCGCTTCACAAAC
CTCATTGCTGAGCCTGATGCGTCTGAAGAGGCGGTGACAGAGGCTGTAAACAATACATTGAAAGCGATTGCGGCTAGCTT
GCTTATGGAGCAAGTTTTGGCACCACGATTTAATTTTACGCCTAAGAACCCAACTAGCGGTGCGCAAGCTAATTTTGACT
ATGGCGAAGCTGGATACAATCCTAACAAGTGCAATGTAGGATTCAGTGAAGAACGCGGCCAATTTGATATTGAGATTAAA
GGGCTAAAAGAGCCGACCTCAAAAGAAGCAAAGCGGATTTGCAATGAGGACTTAAACGAAGTCATTACTGCGTTTGCACA
AGATAAGAAGACTATTGAGCGAGGGTTGTTTGATGATGAACTTATTCCAGAAGAGCTAACGCAGGTGCGCATGGGTAAGA
TAGTAAAGGACCGCTATCCAGAACTTGACGCCAATGACCAAGAAGCTGTTCGTCAACGTGCTATTGCTGCTCTGAATATT
ACTCAAGAAGCTAAACGCGTTGCCAATCAAGGTGAAGGTAGTGAGCCAAATGTAAATACAGCGTTTGTAGATGGTGTTAG
AAAGTACGTTACAGACGTCACTGAGCTTGATATTGATTTGATCGACCGGATAAACCCTTTCTCAGAGGCTTATTCAATCC
TTTCTAAAACAATGGATGAGGAACGTCTAAAGCAAGTTAAAGCGATTATGTCAGGTAAGCAGATTAAGCTTTCTCCAGAT
GAAGCGCGTGATCTTGCAAAGCGTGCATTATTATTCAAACAAGAAAGAGGGCGTTTACCGTCGATTACCTCGCAAGATGC
CTGGGAAAAAAGAATGGCAGAGGGCGTTGCCTTTTTAGCGCGAATGAAAGCAGAGGCTAGCGATGGTTAA

Protein sequence :
MVCNNSVPSVSVNYAQNGSSKKSNELGMRPMQEQAFEKRGEQYLLIKSPPASGKSRALMFVALDKLHNQGVKQALIVVPE
KSIGSSFNDEPLSKFGFWADWEVEPQWNLCNAPGGDDGKVGAVGKFLDSDSKILVCTHATFRFAVDRLGVEAFDDRLIAV
DEFHHVSANPDNKLGAHLIDFMARDKVHIVAMTGSYFRGDADAVLLPEDEAKFEKVVYTYYEQLNGYEYLKSLDIGYFFY
SDAYADDIMKVLDPNEKTIIHIPSVNSRESTKLGKNIEVDHILDALAGGKEGSWKGIDPETGFHLVEAENGKLLRIADLV
EDDPAKRDKVSASLKDPAEKNNRDHVDIIIALGMAKEGFDWIWCEHALTIGYRSSLTEIVQIIGRATRDAKGKTKARFTN
LIAEPDASEEAVTEAVNNTLKAIAASLLMEQVLAPRFNFTPKNPTSGAQANFDYGEAGYNPNKCNVGFSEERGQFDIEIK
GLKEPTSKEAKRICNEDLNEVITAFAQDKKTIERGLFDDELIPEELTQVRMGKIVKDRYPELDANDQEAVRQRAIAALNI
TQEAKRVANQGEGSEPNVNTAFVDGVRKYVTDVTELDIDLIDRINPFSEAYSILSKTMDEERLKQVKAIMSGKQIKLSPD
EARDLAKRALLFKQERGRLPSITSQDAWEKRMAEGVAFLARMKAEASDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0715_00996 YP_008216144.1 hypothetical protein Not tested AbaR27 Protein 2e-84 44
CDPW8_0255 YP_005141822.1 putative ATP-dependent helicase Not tested Not named Protein 8e-95 44