Gene Information

Name : Hbal_0550 (Hbal_0550)
Accession : YP_003058949.1
Strain : Hirschia baltica ATCC 59814
Genome accession: NC_012982
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 585405 - 586172 bp
Length : 768 bp
Strand : -
Note : TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: pzu:PHZ_c0922 flagellar biosynthesis protein FliP

DNA sequence :

ATGCGCGCCCTTAAACGCTCGACCAAGATGATGGGCCGCGTCACGCTCCTATTATTAGGTACGCTATTACTGGCACCTGC
GGGTATCGCTCAGGAATTTAATTTCGATTTAGGCACCGGCGCAGGCATGACGAGCGGCATTGTTGAAATGCTCGGCGTGA
TCACGATTTTATCCTTAGCGCCGTCAATTTTGGTGATGACAACAAGCTTTGTGCGTATTGTGGTGGTGCTATCTTTATTG
CGAACAGCAATGGGGCTTCAACAAGCGCCGCCCAATGCGGTGATTATCTCGCTTTCCCTATTCCTAACCGCTTTTGTTAT
GGCTCCCACTTTTGAAGCAGCCTATAAGGAAGGGGTTGAACCCTTCATGGCCGAATCTATCGGATTAGAAGACGCCCTGC
CACGCGCTGCTGCCCCGATTAAAACCTTTATGGCCAAGCATGTGCAAGATGATGATCTGGCATTGTTTATGGGCATGGCA
AATATAGAAACACTAGAAAGCGCAGAAGCAGCGCCGTTTCAGGTGCTGGCACCAGCCTTCATGATATCCGAGCTGAAGCG
CGCCTTTGAGATCGGGTTTATGATATTCCTTCCCTTCCTCGTGATCGACCTTGTTGTGGCTTCTATCCTGATGAGTATGG
GGATGATGATGTTGCCGCCTGTGACAATCTCTATGCCGTTTAAGCTCATCTTTTTCGTGCTGGTGGATGGCTGGCGGTTA
TTGGCTGGATCACTTGTCGAAAGCTTCGTGGCTGGCCCGCCTGGTTAG

Protein sequence :

MRALKRSTKMMGRVTLLLLGTLLLAPAGIAQEFNFDLGTGAGMTSGIVEMLGVITILSLAPSILVMTTSFVRIVVVLSLL
RTAMGLQQAPPNAVIISLSLFLTAFVMAPTFEAAYKEGVEPFMAESIGLEDALPRAAAPIKTFMAKHVQDDDLALFMGMA
NIETLESAEAAPFQVLAPAFMISELKRAFEIGFMIFLPFLVIDLVVASILMSMGMMMLPPVTISMPFKLIFFVLVDGWRL
LAGSLVESFVAGPPG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
lscR	AAO18040.1	LscR	Virulence	TTSS locus	Protein	2e-34	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Hbal_0550	YP_003058949.1	flagellar biosynthetic protein FliP	VFG2338	Protein	8e-54	51
Hbal_0550	YP_003058949.1	flagellar biosynthetic protein FliP	VFG2494	Protein	4e-54	50
Hbal_0550	YP_003058949.1	flagellar biosynthetic protein FliP	VFG1259	Protein	6e-53	50
Hbal_0550	YP_003058949.1	flagellar biosynthetic protein FliP	VFG2016	Protein	2e-47	47
Hbal_0550	YP_003058949.1	flagellar biosynthetic protein FliP	VFG0188	Protein	1e-37	44
Hbal_0550	YP_003058949.1	flagellar biosynthetic protein FliP	VFG0394	Protein	1e-36	44
Hbal_0550	YP_003058949.1	flagellar biosynthetic protein FliP	VFG0044	Protein	4e-35	43