Gene Information

Name : Hbal_0037 (Hbal_0037)
Accession : YP_003058436.1
Strain : Hirschia baltica ATCC 59814
Genome accession: NC_012982
Putative virulence/resistance : Unknown
Product : deoxyribodipyrimidine photo-lyase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0415
EC number : 4.1.99.3
Position : 37280 - 38707 bp
Length : 1428 bp
Strand : +
Note : PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: ccs:CCNA_01495 deoxyribodipyrimidine photolyase

DNA sequence :
GTGAATTTGTGCTGGTTTCGTCAGGATTTGAGACTATCTGATAACCCTGCTTTACGATCTGCGTTAAGCGACAATTCTGC
AATTGCTTTATTTATTTTAGAAGAAACTGATACGCAGCGGCCAATGGGAAGCGCTTGTAAGGCTTGGCTACATGAATCAC
TTATCAGATTGCAAAGTGATCTTGAAGCGATTGGTGTACCGCTTGTTCTAAGGCGGGGCGATGCCCGAGATATAATTCCA
AAACTTACTTCTGATCTGAAAATCGACAATGTCTATTGGAACAGGCGCTATGACCCCAAAGACGTTGCAATAGACCGCGC
TCTTATGGAGCACCTGAAAGAAGAGGGTGTGAATGTTGAGAGTTTCAAAGCGAATGTGCTGTTTGAGCCATGGGAGATTA
AAAGCGCGGGCGCAGGGACACCCTATAAGGTATTCTCTCCTTTCTGGAAGGCAGCTTTAAAAGAAGGTGTTCCTGCGCAA
AGTTTAGCGGTTCCAACAAAAATCCAATCAAAACCCCAACTGGATCAATTGCCATTTGATAATTTGGAAGATTGGGATTT
GATGCCAGCATCACCCAATTGGACGAATGGGTTTTGGGATGTCTGGGTTCCAGGTGAAGCGGGCGCTTTTGAACGGTTCA
AAGAATTTCTGGAGATTAACTTGAAAGGTTATAGTCAGAATAGAGATGTTCCGTCTAAAAACCATACATCTTGTCTTTCT
CCACATCTGCGTTTTGGAGAAATTTCACCGCTTCAGATTTGGCATGGTGTTCATGCCCATTCAGGCGGAGAAGTTGATAA
GGATGGCTACAAATTTCTTGCTGAAGTGGGATGGAGAGAGTTTTCGCACTCTATTTTATTTTATGCAGACAATTTATCGC
AAACGAATTGGAAATCAGATTTTGATGGTTTTGCGTGGGTTCAAGATGAAAATGGTTTAACGGCGTGGCAATCTGGGCAA
ACCGGTTATCCGCTGGTTGATGCTGGGATGCGAGAGCTATGGCAGACAGGCTATATACACAATCGTGTGCGTATGGTGGT
AGCCTCTTTTTTAATCAAACACCTTCGTATTGATTGGCGAGAAGGGGAGGCATGGTTTTGGGATACTTTGGTGGATGCAT
GTCCAGCGAATAATCCGGCAAGCTGGCAATGGGTTGCTGGTTCTGGTGCGGATGCATCGCCTTTTTTCAGGATTTTCAAT
CCAATCATGCAGTCTGAAAAATTTGACCCAAAAGGTAGCTACATCCGCAAATGGGTGCCGGAGCTAGCGAATTTGGATAA
CAAATCTATTCACACACCATGGGAGGCACCTAAACTTGTTTTACAAGAAGTGGGGGTGAGGCTTGGTGAAAACTACCCCA
AACCGATTGTGGATCACAAAACAGCACGAGATAAAGCTTTGGCGGCTTATAAGGATATGACGGCTTAG

Protein sequence :
MNLCWFRQDLRLSDNPALRSALSDNSAIALFILEETDTQRPMGSACKAWLHESLIRLQSDLEAIGVPLVLRRGDARDIIP
KLTSDLKIDNVYWNRRYDPKDVAIDRALMEHLKEEGVNVESFKANVLFEPWEIKSAGAGTPYKVFSPFWKAALKEGVPAQ
SLAVPTKIQSKPQLDQLPFDNLEDWDLMPASPNWTNGFWDVWVPGEAGAFERFKEFLEINLKGYSQNRDVPSKNHTSCLS
PHLRFGEISPLQIWHGVHAHSGGEVDKDGYKFLAEVGWREFSHSILFYADNLSQTNWKSDFDGFAWVQDENGLTAWQSGQ
TGYPLVDAGMRELWQTGYIHNRVRMVVASFLIKHLRIDWREGEAWFWDTLVDACPANNPASWQWVAGSGADASPFFRIFN
PIMQSEKFDPKGSYIRKWVPELANLDNKSIHTPWEAPKLVLQEVGVRLGENYPKPIVDHKTARDKALAAYKDMTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0113 NP_938509.1 riboflavin biosynthesis protein Not tested Not named Protein 8e-68 42
CD241_0111 YP_005124380.1 putative riboflavin biosynthesis protein Not tested Not named Protein 5e-68 42