Gene Information

Name : Hbal_2270 (Hbal_2270)
Accession : YP_003060647.1
Strain : Hirschia baltica ATCC 59814
Genome accession: NC_012982
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 2425168 - 2427060 bp
Length : 1893 bp
Strand : +
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGAACAAACCAACTTCCCAACACGAGTTTGAAACACCTAAAGTGACGACTGGCCCGCTGCCAAGCTCTCGCAAGGTTTA
CACTCACCCTGTCGCAGACCCAAGCCTATCTGTGCCCCGCCGTGAGATTGACCTCCACCCAAGCGCGAATGAGCCGCCCG
TGCCCGTCTATGACACATCCGGCCCTTACTCAGACCCATCCGTCATTATTGACGTTGAAAAAGGTCTGCCGCGCATCCGT
GATGGCTGGGTACAAGCGCGCTCAAACGTTGAAGAATATGAAGGCCGCCCAATCAAAATTGAAGATAATGGCGGCGCGAC
AGGTAAACACCTTGCCCGCGAATTTCCAACCAAGCACAAGCCCCTGCGCGGTGTAGGCGATGGCCCAATCACCCAATATG
AATTTGCAAAAGCCGGCATCATCACCAAAGAGATGATCTACATCGCCGAACGCGAAAACATGGGCCGCAAGGAAGCCGTA
GCCAATGCTGCTGAAACAGTGGCACAAGGAGAGAGCTTTGGCGCAGAAATTCCAGAATTTATCACACCTGAATTTGTCCG
CGATGAAGTGGCCCGTGGCCGCGCGGTTATCCCCTCAAACATCAACCACCCAGAGCTAGAGCCGCAAATCATTGGCCGCA
ACTTCCTCGTGAAGATCAACGCCAATATTGGTAACTCCGCCGTGACCTCTTCTGTTGAAGAAGAAGTTGAAAAAATGGTC
TGGGCCACGCGTTGGGGTGCAGACAATGTGATGGACCTTTCAACAGGTCGCAACATTCACAACACCCGCGAATGGATTTT
GCGCAACTCCCCTGTGCCAATCGGAACAGTGCCAATCTACCAAGCTTTGGAAAAAGTAAACGGCATCGCCGAAGACCTCA
CATGGGAAGTTTACCGCGACACATTGATCGAGCAATGTGAGCAAGGCGTCGACTATTTCACCATCCACGCTGGTGTGCGC
TTGGCATACATCCACCTCACCGTAAACCGCGTATGTGGTATCGTGTCCCGTGGTGGTTCCATCATGGCCAAATGGATGCT
GACCCACCACAAGGAAAGCTTCCTCTACACCCACTTTGAAGAAATCTGTGACATCATGCGCAAGTATGACGTCACATTCT
CCTTGGGTGATGGCTTGCGTCCGGGTGCTGTGGCGGACGCCAATGACCGCGCCCAATTTGCCGAGCTTGAAACACTTGGC
GAGTTGACAAAAATCGCTTGGGATAAAGGCTGTCAGGTGATGATTGAAGGCCCAGGTCACGTGCCAATGCACAAGATCAA
GGTCAACATGACCAAACAACTTAAAGAATGCGGCGAAGCGCCCTTCTACACGCTTGGCCCCCTCACAACAGATATCGCAC
CGGGTTATGACCACATCACTTCCGGTATCGGGGCGGCTATGATTGGGTGGTACGGAACAGCCATGCTTTGCTACGTGACG
CCAAAAGAACATCTTGGCTTGCCAAACCGTGATGACGTTAAAGTCGGTGTGATCACATACCGCCTCGCCGCCCACGCAGC
CGACCTTGCCAAAGGCCACCCTGCCGCGCAAATCCGCGATGATGCTGTCTCCCGTGCGCGTTTTGACTTCCGCTGGGAAG
ATCAATTCAACCTCGCGCTAGACCCTGAAACAGCCCGTGATTTCCACGACCAGACATTGCCAAAAGACGCGCACAAAGTG
GCGCACTTCTGCTCCATGTGTGGCCCGAAATTCTGCTCCATGAAAATCACGCAAGACGTGCGCGATTACGCCGACACACT
CTCCGACAATGAGAAAAAAGCCCTCCAACTCGAAGCCGAACAAGGCATGAGCGAAATGAGCAAAAAATTCGTCGAAAAAG
GCGGCGAAATCTACCTCAGCGAGTCAGGCGAAAAACGCGAACCGATTGATTGA

Protein sequence :
MNKPTSQHEFETPKVTTGPLPSSRKVYTHPVADPSLSVPRREIDLHPSANEPPVPVYDTSGPYSDPSVIIDVEKGLPRIR
DGWVQARSNVEEYEGRPIKIEDNGGATGKHLAREFPTKHKPLRGVGDGPITQYEFAKAGIITKEMIYIAERENMGRKEAV
ANAAETVAQGESFGAEIPEFITPEFVRDEVARGRAVIPSNINHPELEPQIIGRNFLVKINANIGNSAVTSSVEEEVEKMV
WATRWGADNVMDLSTGRNIHNTREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEVYRDTLIEQCEQGVDYFTIHAGVR
LAYIHLTVNRVCGIVSRGGSIMAKWMLTHHKESFLYTHFEEICDIMRKYDVTFSLGDGLRPGAVADANDRAQFAELETLG
ELTKIAWDKGCQVMIEGPGHVPMHKIKVNMTKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVT
PKEHLGLPNRDDVKVGVITYRLAAHAADLAKGHPAAQIRDDAVSRARFDFRWEDQFNLALDPETARDFHDQTLPKDAHKV
AHFCSMCGPKFCSMKITQDVRDYADTLSDNEKKALQLEAEQGMSEMSKKFVEKGGEIYLSESGEKREPID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 65
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 65
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 63