Gene Information

Name : Hbal_1578 (Hbal_1578)
Accession : YP_003059963.1
Strain : Hirschia baltica ATCC 59814
Genome accession: NC_012982
Putative virulence/resistance : Unknown
Product : DEAD/DEAH box helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1664787 - 1666850 bp
Length : 2064 bp
Strand : -
Note : PFAM: DEAD/DEAH box helicase; helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; KEGG: rec:RHECIAT_CH0002143 ATP-dependent DNA helicase p

DNA sequence :
ATGAGACCAGAAATCCTCTTTCCATTCTTTAAGGACCTCAAAAGCCTTCCTGGCATTGGTCCTAAAACTGCTCCACTCCT
CCAAAGGCTGGTTGGCGGTGATACGGTATTGAATCTATTGCTGCATTTGCCGATTAATTGGATTGACAGAAGTGTCCGCG
ATTCATTCTTTGAAACAATTGTTGGTGAAATCGCAACAGTACGCGGTGTTGTTGATTCTGTCTTTGCTGGACAAGGTAAT
GCACCAACCCGTGTTCGCTTGTTAGACGATACTGGTTTCTTGACGCTGGTTTTCTTTCGCGCACAACCTGCTTGGTTGCA
AAAACAGTTTCCAATGAACCAGGAAATGATCGTGTCTGGGCTGATCGAAGACTTTAACGGCCAGAGACAAATGGTGCACC
CTGATCATGTCTGCAATCCAGCAAAGGGAGAAGAACCACCTGAAGTGGAGCCTGTGTATCGCCTGACTGCAGGTGTAACT
TCCCGTCTGCTCCAAAAAGCTATTTCGGCGTCATTAGAAAACCTTCCTCAATTACCTGAGTGGATTGATCAAGCTTTCCT
TGAACAAAAAAAATGGCCAAGTTTTGTAGATGCGCTCAAGCAACTCCATCAACCTGAAACATTAGATCAACCAGCTCTAA
ATCTTGCACATGAACGGCTGGCATATGATGAAGCCCTTGCTCGTGAATTCGCACTGAATGAAATTCGCCTCAATCGCCAA
AAAACACCAGCAACTCCCATCCCCCGACACACTCACGCAACAAATAACCTACTCGAAGCCCTCAAATTCTCACCAACGCA
CGCACAATTGCGTGCATTTAAAGACATCCAAACTGACCTCGCACGTGAGCTTCCAATGCGCCGTATGCTGCAAGGAGATG
TTGGAACAGGGAAAACACTCGTGGCCGCGCTTGCCATTGCTCAGGCAGCTGCTTCAGGTCAATTTTCGGCTTTTATGTCA
CCTACTGAAGTCCTTGCCCGTCAACAGGCTACTGCCTTACAAAACTTTTTAAAACCAATCGGTTATCGCTGCGAAGCCCT
TACCGGAAGAGATAGCAAAAAACGCCGAAAAGAACTATTAGATGCAGTTGCCGCTGGGGAAATACACTGTCTTTCAGGCA
CTCAAGCTTTATTCCAAACGGATGTTCAACTTCCAAATCTAGGCTTGGTAATCATCGATGAACAGCATCGTTTTGGTGTA
GCAGACAGGCTAAAACTAACCTCCAAAGGCAATGCTCCTCACATGTTGATGATGAGTGCAACACCCATTCCCCGTTCCCT
TGCCGCCGCAATCAATGGTGACCTAGACACTTGTATTTTGGATGAAAAACCTCAACAAAGGAAACCCATCACAACACGCG
TTGCTTCTGAAGAACGCATTGAAGATGTCATGATTGCTGTTGCAAAAGCAGCAGACCGCGGCGAACGCGCTTTCTGGGTA
TGTCCTGCAATTGATTCTGAAACAGCAGAAGATGCGTCCGTGATTGCGCGTAAGGAGATACTTCAAAAATATGTAAAACA
CCCCGTTGCCCTTGTTCATGGCAAAATGGCACCAGCAGAAAAAGATGCAGCCTTAGATGCTTTTCGAACGGGCGAAGCTA
GTGTTTTAGTCGCAACGACAGTGGTTGAAGTTGGTATCGACGTTCCTGAAGCAACCATAATGGTTATTGAGCATGCAGAA
GGCTTTGGCCTTGCTCAACTCCATCAGCTTAGAGGTCGTGTCGGACGTGGAGATAAAAGCTCTTCTTGTTTACTTCTATA
CAAACCGCCCTTGTCTGAAAGCGGTCAAAAACGTTTGAACACTTTGCGAGAAACTGAAGATGGTTTTCTAATTGCTGAGG
CTGATTTTAAACAACGAGGCCCTGGGGACCTATTAGGGTTAAAACAATCAGGACTGCCAAACTTTAAAATTATAGACCTA
ACTCGTCACATTGAAATGTTCCAACTTGTTCGCAACGATGTGAAACAGCTACTTTCTGAAGGCCCAAATTCAAATCCTCC
TCGGACAGAAGCAATAAGTCTTTTAAATGAATTATTTAAAACCGATATCGCTATAAAGTACTGA

Protein sequence :
MRPEILFPFFKDLKSLPGIGPKTAPLLQRLVGGDTVLNLLLHLPINWIDRSVRDSFFETIVGEIATVRGVVDSVFAGQGN
APTRVRLLDDTGFLTLVFFRAQPAWLQKQFPMNQEMIVSGLIEDFNGQRQMVHPDHVCNPAKGEEPPEVEPVYRLTAGVT
SRLLQKAISASLENLPQLPEWIDQAFLEQKKWPSFVDALKQLHQPETLDQPALNLAHERLAYDEALAREFALNEIRLNRQ
KTPATPIPRHTHATNNLLEALKFSPTHAQLRAFKDIQTDLARELPMRRMLQGDVGTGKTLVAALAIAQAAASGQFSAFMS
PTEVLARQQATALQNFLKPIGYRCEALTGRDSKKRRKELLDAVAAGEIHCLSGTQALFQTDVQLPNLGLVIIDEQHRFGV
ADRLKLTSKGNAPHMLMMSATPIPRSLAAAINGDLDTCILDEKPQQRKPITTRVASEERIEDVMIAVAKAADRGERAFWV
CPAIDSETAEDASVIARKEILQKYVKHPVALVHGKMAPAEKDAALDAFRTGEASVLVATTVVEVGIDVPEATIMVIEHAE
GFGLAQLHQLRGRVGRGDKSSSCLLLYKPPLSESGQKRLNTLRETEDGFLIAEADFKQRGPGDLLGLKQSGLPNFKIIDL
TRHIEMFQLVRNDVKQLLSEGPNSNPPRTEAISLLNELFKTDIAIKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 1e-119 46