Gene Information

Name : Hbal_1270 (Hbal_1270)
Accession : YP_003059659.1
Strain : Hirschia baltica ATCC 59814
Genome accession: NC_012982
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1332902 - 1333573 bp
Length : 672 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pla:Plav_0928 two component transcriptional regulator

DNA sequence :
ATGCGCCTTTTAGTCGTTGAGGATGACCCAGATTTGGGACGTCAGTTGAAAACATCATTATCGGAAGCTGGATACGCAGT
CGATCTGGCTGTCGACGGTGAGGATGGTCACTATCTCGGCGAAACTGAGCCATATGATGCTGTCATTCTGGATTTGGGAC
TTCCCAAAATGGATGGTGTGCGTGTTCTCGAAAAATGGCGGGCTGAAGGTAAAGTCATGCCTGTTCTTATCTTGACAGCG
CGAGATCGCTGGAGCGAGAAGGTTGCTGGATTTGATGCTGGTGCAGATGATTATCTGACCAAGCCATTCATTACCGAAGA
ATTATTGGCACGTTTGCGTGCTTTGCTGCGCCGCTCTGCTGGACATGCAAGTTCGGCTTTAGAATTGGGTGATTTGCGGG
TTGATACGAGCTCGGCAAGGGCCACTGTTGGCGGCCAACCTATCAAGCTAACAGCACATGAATATCGTGTGCTGAGTTAT
ATGATGCATTATCAAGGACGTGTTGTGCCACGCACGGAACTTGTGGAGCACATTTATGACCAAGATTTTGACCGTGATTC
CAATACAATCGAAGTATTTGTGGGGCGTTTGCGTAAAAAAATTGGATCTGATCGCATTCTAACTGAACGAGGTCTTGGGT
ATAGATTGGTCGATCCAGCTGCAAATGAATAA

Protein sequence :
MRLLVVEDDPDLGRQLKTSLSEAGYAVDLAVDGEDGHYLGETEPYDAVILDLGLPKMDGVRVLEKWRAEGKVMPVLILTA
RDRWSEKVAGFDAGADDYLTKPFITEELLARLRALLRRSAGHASSALELGDLRVDTSSARATVGGQPIKLTAHEYRVLSY
MMHYQGRVVPRTELVEHIYDQDFDRDSNTIEVFVGRLRKKIGSDRILTERGLGYRLVDPAANE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hbal_1270 YP_003059659.1 transcriptional regulator NC_002516.2.879194.p Protein 8e-35 49
Hbal_1270 YP_003059659.1 transcriptional regulator CP000647.1.gene1136. Protein 5e-34 48
Hbal_1270 YP_003059659.1 transcriptional regulator BAC0530 Protein 5e-34 48
Hbal_1270 YP_003059659.1 transcriptional regulator CP001918.1.gene2526. Protein 3e-32 46
Hbal_1270 YP_003059659.1 transcriptional regulator NC_002695.1.913289.p Protein 1e-32 44
Hbal_1270 YP_003059659.1 transcriptional regulator CP000034.1.gene2022. Protein 9e-33 44
Hbal_1270 YP_003059659.1 transcriptional regulator CP001138.1.gene1939. Protein 2e-32 44
Hbal_1270 YP_003059659.1 transcriptional regulator BAC0487 Protein 2e-27 44
Hbal_1270 YP_003059659.1 transcriptional regulator BAC0083 Protein 2e-28 44
Hbal_1270 YP_003059659.1 transcriptional regulator CP004022.1.gene1005. Protein 1e-34 43
Hbal_1270 YP_003059659.1 transcriptional regulator BAC0638 Protein 3e-25 43
Hbal_1270 YP_003059659.1 transcriptional regulator BAC0125 Protein 9e-27 42
Hbal_1270 YP_003059659.1 transcriptional regulator BAC0308 Protein 1e-23 42
Hbal_1270 YP_003059659.1 transcriptional regulator BAC0197 Protein 1e-25 42
Hbal_1270 YP_003059659.1 transcriptional regulator BAC0347 Protein 5e-24 41
Hbal_1270 YP_003059659.1 transcriptional regulator BAC0111 Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hbal_1270 YP_003059659.1 transcriptional regulator VFG0475 Protein 1e-32 44
Hbal_1270 YP_003059659.1 transcriptional regulator VFG0473 Protein 2e-26 42
Hbal_1270 YP_003059659.1 transcriptional regulator VFG1390 Protein 1e-25 41