|
Name : hslU (HELPY_0831) Accession : YP_003057567.1 Strain : Helicobacter pylori B38 Genome accession: NC_012973 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 821379 - 822710 bp Length : 1332 bp Strand : - Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGTCTAAATTGAATATGACCCCACGAGAAATTGTCGCTTATTTAGATGAATACATCATTGGGCAAAAGGAAGCTAAAAA GTCTATCGCTATCGCTTTTAGGAATCGTTACAGGCGTTTGCAACTGGAAAAATCCTTACAAGAAGAAATCACGCCTAAAA ACATTTTAATGATTGGCTCTACTGGCGTGGGTAAAACTGAAATCGCAAGAAGAATAGCAAAAATCATGGAACTCCCCTTT GTGAAAGTGGAAGCGAGCAAATACACAGAAGTGGGTTTTGTGGGGCGCGATGTGGAGTCTATGGTAAGGGATTTAGTCAA TAACAGCGTGCTTTTAGTGGAAAATGAGCATAAAGAAAAATTAAAAGACAAGATTGAAGAAGCGGTTATAGAAAAAATCG CTAAAAAACTCCTACCCCCCTTGCCTAGTGGCGTGAGCGAAGAGAAAAAACAAGAATACGCTAACAGCCTTTTAAAAATG CAACAAAGAATCGCGCAAGGCGAGTTGGATAGTAGAGAAATTGAAATTGAAGTGCGTAAAAAAAGCATAGAGATTGATTC TAATGTGCCGCCTGAAATTTTAAGGGTTCAAGAAAACTTGATTAAAGTTTTCCATAAAGAACAGGATAAAGTCAAAAAAA CTTTAAGCGTTAAAGAGGCTAAAGAAGCCCTAAAGGCAGAAATTAGCGACACGCTTTTAGACAGCGAAGCCATTAAAATG GAGGGTTTGAAGCGCGCGGAAAGTTCAGGGGTGATTTTTATTGATGAAATTGATAAGATCGCTGTAAGCTCTAAAGAAGG AAGCCGTCAAGATCCCAGTAAAGAGGGGGTTCAAAGGGATTTGTTGCCGATTGTAGAGGGGAGTGTGGTGAATACGAAGT ATGGTTCTATTAAAACAGAGCATATTTTATTCATTGCAGCCGGGGCTTTTCATCTTTCTAAACCAAGCGATTTGATCCCT GAATTGCAGGGGCGTTTCCCTTTAAGGGTGGAGTTAGAGAATTTAACCGAAGAAATCATGTATATGATTTTAACCCAAAC TAAAAACTCTATCATCAAGCAATACCAAGCCCTTTTACAAGTGGAAGGCGTAGGAATTGCGTTTGAAGACGATGCGATCA AAGAGTTAGCCAAACTTTCTTATAACGCCAATCAAAAAAGCGAAGATATAGGCGCTAGAATGTTGCACACCACCATTGAA AAAGTGCTAGAAGACATTAGTTTTGAAGCGGAGGATTATTTTGGGCAAAAGGTTACTATCACTAAAGAATTGGTTCAATC CAAGCTAGAGGATTTAGTGGCTGATGAAAATTTAGTGAAGTATATTTTATAA Protein sequence : MSKLNMTPREIVAYLDEYIIGQKEAKKSIAIAFRNRYRRLQLEKSLQEEITPKNILMIGSTGVGKTEIARRIAKIMELPF VKVEASKYTEVGFVGRDVESMVRDLVNNSVLLVENEHKEKLKDKIEEAVIEKIAKKLLPPLPSGVSEEKKQEYANSLLKM QQRIAQGELDSREIEIEVRKKSIEIDSNVPPEILRVQENLIKVFHKEQDKVKKTLSVKEAKEALKAEISDTLLDSEAIKM EGLKRAESSGVIFIDEIDKIAVSSKEGSRQDPSKEGVQRDLLPIVEGSVVNTKYGSIKTEHILFIAAGAFHLSKPSDLIP ELQGRFPLRVELENLTEEIMYMILTQTKNSIIKQYQALLQVEGVGIAFEDDAIKELAKLSYNANQKSEDIGARMLHTTIE KVLEDISFEAEDYFGQKVTITKELVQSKLEDLVADENLVKYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 0.0 | 99 |
