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Name : hom (HELPY_0534) Accession : YP_003057310.1 Strain : Helicobacter pylori B38 Genome accession: NC_012973 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0460 EC number : 1.1.1.3 Position : 524170 - 525435 bp Length : 1266 bp Strand : - Note : catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine DNA sequence : ATGAAAAAAAGATTGAATATAGGGCTTGTGGGTTTAGGGTGTGTGGGGAGCGCGGTCGCTAAAATCTTACAAGAAAATCA AGAAATCATCAAAGACAGGGCCGGCGTGGAAATTAAAATTAAAAAAGCGGTGGTGCGAGACGTGAAAAAGCACAAAGGCT ATGCTTTTGAAATCAGTGATGATTTAGAAAGCCTAATAGAAGATAAAGAAATTGATATTATCGTGGAGCTTATGGGTGGG GTGGAAGCGCCTTATCTTTTAGCTAAAAAAACTTTAGCCAAACAAAAAGCCTTCGTTACAGCCAATAAAGCCATGTTAGC GTACCACCGCTATGAATTAGAACAGATCGCTAAAAACACCCCCATAGGTTTTGAAGCGAGCGTGTGTGGGGGTATCCCTA TTATCAAGGCTTTAAAAGACGGCTTGAGCGCTAATCACATCCTTTCTTTTAAAGGGATTTTAAACGGCACAAGCAATTAC ATTTTAAGCCAGATGTTTAAAAATCAAGCGAGCTTTAAGGACGCTTTGAAAGACGCGCAGCATTTAGGCTATGCGGAATT GAACCCTGAATTTGACATTAAGGGCATTGATGCGGCGCACAAATTATTGATTTTAGCGTCTTTAGCCTATGGCATTGACG CGAAATTAGAAGAAATTTTAATTGAAGGCATTGAAAAAATAGAGCCAGACGACATGGAGTTTGCTAAAGAATTTGGTTAT AGCATTAAACTTTTAGGCATCGCTAAAAAACACCCAGATTGCATTGAATTAAGGGTGCATCCAAGCATGATTAAAAATGA ATGCATGCTCTCTAAAGTGGATGGGGTGATGAACGCTATCAGCGTTATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGGGCTGGGGGAGAGCCTACTGCAAGCGCAGTCATTAGCGATATTATAGAAATCGCAAGGAAAAAAAGCTCTCTA ATGCTAGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAAATCCAATGCGCTTATTATGCGCGTTTGTT AGTGAGCGATGAAAAAGGGGTTTTTTCTCAAATCAGCGCGATTTTAGCTAAAAATGATATTTCACTCAACAATGTCTTGC AAAAAGAAATCCCGCAATCCAATAAGGCTAAAATCTTGTTTTCCACGCACACCACCAACGAAAAGTCTATGCTGAACGCC CTTAAAGAGCTTGAAAATTTACAAAGCGTGTTGGATACCCCTAAAATGATCCGTTTGGAAAATTGA Protein sequence : MKKRLNIGLVGLGCVGSAVAKILQENQEIIKDRAGVEIKIKKAVVRDVKKHKGYAFEISDDLESLIEDKEIDIIVELMGG VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQIAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY SIKLLGIAKKHPDCIELRVHPSMIKNECMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKEEIQCAYYARLLVSDEKGVFSQISAILAKNDISLNNVLQKEIPQSNKAKILFSTHTTNEKSMLNA LKELENLQSVLDTPKMIRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 7e-68 | 41 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 7e-68 | 41 |
