|
Name : HELPY_0143 (HELPY_0143) Accession : YP_003056962.1 Strain : Helicobacter pylori B38 Genome accession: NC_012973 Putative virulence/resistance : Unknown Product : L-lactate permease, LctP family; membrane protein Function : - COG functional category : C : Energy production and conversion COG ID : COG1620 EC number : - Position : 142549 - 144204 bp Length : 1656 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 8407843, 11785976; Product type t : transporter DNA sequence : GTGTCAGAATTTCATCAAGTTTATGACCCTTTGGGTAATGTTTGGCTGAGCGCTCTTGTAGCCTTATTGCCGATTTTATT ATTTTTCTTATCTTTAATGGTTTTTAAACTCAAAGGTTATACAGCGGCCTTTTTGAGCGTGGCCTTATCAGCCATTATTG CGGTTTTAGTGTATAAAATGCCTGTTAGCATGGTGGGTTCAAGCTTTCTTTATGGCTTCCTCTATGGCTTATGGCCGATC GCATGGATCATTATTGCGGCGATTTTTTTATACAAACTCAGCGTTAAATCCGGCTATTTTGAAATTTTAAAAGAAAGCGT CCAGTCCATCACTTTAGATCACCGCATTTTAGTGATTTTGATTGGCTTTTGTTTTGGATCGTTTTTAGAAGGAGCGATCG GGTTTGGAGGGCCTATTGCTATAACAGCAGCGATTTTAGTGGGCTTAGGGTTAAGCCCTTTATATTCTGCCGGATTGTGC CTAATCGCTAACACCGCTCCTGTAGCTTTTGGCGCGGTGGGTATCCCTATAAGCGCGATGGCGAGCGCGGTAGGGGTGCC AGCGATTTTAATTTCAGCCATGACGGGTAAAATCCTCTTTTTTGTGAGCTTGTTCGTGCCGTTTTTCATCGTGTTTTTGA TGGATGGCTTTAAGGGGATTAAAGAAACTTTTCCGGCCGTTTTTATCGCGGCTTTTTCTTTCGCTGGCGCGCAATTTTTA AGCTCTAATTATTTGGGGCCAGAATTGCCTGGTATTATTTCAGCCCTTGTTTCACTAGTTGCGACAGCGCTCTTTTTGAA ATTCTGGCAGCCTAAAGCGATTTTTAGAAGCGATGGCAAAGCGGCTTCATTCACTAAGAGTAACCATCATATCTGTAAGA TCTATGTCGCTTGGTCTCCTTTTGTGATTTTGGTTTTAGTGATTGTGCTATGGATACAGCCTTTTTTTAAAGCTTTGTTT GAGAAAGACGGCTTGTTAGCTTTTTCTAATTTTTATTTTGAATTCAATAACATCAGCAACCACATCTTTAAAAGCCCGCC TTTTGTAGAAGCCAATCAAAGCGTGAGTTTTCCGGTGGTGTTTAAATTTTTCTTAATCAACACGGTTGGCACTTCCATTT TTTTAGCCGCTCTTATTAGTATGCTCGTTTTAAGGGTGCGAGTGAGCGATGCAGTGAGCGTCTTTGGCGAGACTTTAAAA GAAATGCGCTACCCCATTCTCACCATTGGCTTAGTCTTAAGCTTTGCCTATGTGTCTAATTACAGCGGGATTTCTTCCAC TCTAGCCTTAGCGCTCACGCATACCGGTCTGGCTTTTACTCTTTTCTCGCCCTTGATCGGATGGGTAGGCGTGTTTTTAA CCGGGAGCGATACGAGTTCTAATCTTTTGTTTGGCTCTTTACAGCAACTCACCGCCCAACGATTGCACCTCCCTGAGGTT TTAACCCTAACGGCTAATACCGTGGGAGGCACTTTGGGCAAGATGATAAGCCCTCAAAGTATCGCTATCGCTTGCGCGGC GGTGGGGTTAGCCGGGAAAGAGAGCGATTTGTTCAAATTCACGGTTAAATACTCCCTTATTTTTGTAGCGATCATGGGAA TCGTGATCAGTGCGATTGCGTATTTGATCCCTGAAGTGGTGCCTGCGATAAAGTAG Protein sequence : MSEFHQVYDPLGNVWLSALVALLPILLFFLSLMVFKLKGYTAAFLSVALSAIIAVLVYKMPVSMVGSSFLYGFLYGLWPI AWIIIAAIFLYKLSVKSGYFEILKESVQSITLDHRILVILIGFCFGSFLEGAIGFGGPIAITAAILVGLGLSPLYSAGLC LIANTAPVAFGAVGIPISAMASAVGVPAILISAMTGKILFFVSLFVPFFIVFLMDGFKGIKETFPAVFIAAFSFAGAQFL SSNYLGPELPGIISALVSLVATALFLKFWQPKAIFRSDGKAASFTKSNHHICKIYVAWSPFVILVLVIVLWIQPFFKALF EKDGLLAFSNFYFEFNNISNHIFKSPPFVEANQSVSFPVVFKFFLINTVGTSIFLAALISMLVLRVRVSDAVSVFGETLK EMRYPILTIGLVLSFAYVSNYSGISSTLALALTHTGLAFTLFSPLIGWVGVFLTGSDTSSNLLFGSLQQLTAQRLHLPEV LTLTANTVGGTLGKMISPQSIAIACAAVGLAGKESDLFKFTVKYSLIFVAIMGIVISAIAYLIPEVVPAIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 4e-105 | 52 |
