|
Name : HELPY_0142 (HELPY_0142) Accession : YP_003056961.1 Strain : Helicobacter pylori B38 Genome accession: NC_012973 Putative virulence/resistance : Unknown Product : L-lactate permease, LctP family; membrane protein Function : - COG functional category : C : Energy production and conversion COG ID : COG1620 EC number : - Position : 140850 - 142499 bp Length : 1650 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 8407843, 11785976; Product type t : transporter DNA sequence : ATGGAATTTTATCAAGTCTATGACCCATTAGGCCATATTTGGCTGAGCGCTTTAGTCGCACTCTCGCCTATTGTGCTCTT TTTTATTTCTCTTATTGTCTTTAAACTTAAAGGGTATAGCGCTGGGTTTTTAAGCTTATTGCTTTCAATCCTTATTGCGT TATTTGTGTATAAAATGCCTGCTCAAATGGTGAGTGCGAGTTTTTTCTATGGCTTTCTTTATGGCTTATGGCCGATCGCA TGGATTGTGATCGCTGCGATTTTTCTTTACAACCTTTCAGTGAAATCCGGGTATTTTGAGATTTTAAAAGAAAGCATCTT AACCCTAACGCCGGATCACCGGATTTTGGTGATTTTGATTGGCTTTTGTTTTGGCTCGTTCTTAGAAGGTGCGATTGGTT TTGGAGGCCCGGTAGCGATCACAGCGGCGATTTTAGTCGGCCTTGGGCTAAACCCCTTATACGCTGCCGGATTGTGCCTG ATCGCTAACACCGCTCCTGTAGCTTTTGGCGCGGTGGGCATTCCTATTACGGCAATGGCTAGCGTGGTGGGTATCCCTGA GTTAGAGATTTCTCAAATGGTGGGCAGGGTGTTACCCATTTTTTCCATTGGCATTCCTTTTTTCATCGTGTTTTTAATGG ATGGTTTTAGAGGGATTAGAGAGACTTTTCCTGCAGTGGCTGTTACCGGGTTTAGTTTCGCTATCGCGCAATTTTTAAGC TCTAATTATCTAGGGCCGCAGCTTCCGGATATTATTTCAGCTTTAGTGTCATTGATTTCTACCACTTTGTTTTTAAAATT CTGGCAGCCCAAGCGCATTTTCACCAGCAATGGCAAAGAACCCACGATAAACACAGAAAAACACCATATTTGTAAGGTGG TTGTGGCGTGGATGCCTTTTGTGTTGCTCACGATTACGATTATCATATGGACGCAACCTTGGTTTAAAGCGCTCTTTAAA GAAGGCGGGGCTTTGGCGTTTTCTAGCTTTGCGTTTGAATTTAATTCTATCAGTCAAAAGATTTTTAAAACCGTTCCCAT TGTTACTGAAGCGACCAATTTTCCTGTTGTGTTCAAATTCCCTTTGATTCTAACGACAGGCACTTCCATTTTTTTAGCCG CTCTTTTAAGCGTGTTTTTGTTGCGCGTGAAAATCAGCGATGCGATAGGGGTGTTTGGGGCCACTTTAAAAGAAATGCGT TTGCCGATTTTAACCATTGGCGTGGTTTTAGCGTTCGCGTATGTGGCTAATTATAGCGGCATGAGCGCTACGCTCGCTTT AGCGTTAGCGGATACTGGGCATGTTTTCACTTTCTTTTCGCCTGTTGTAGGCTGGCTTGGGGTGTTTTTAACCGGAAGCG ATACAAGTTCTAATCTTTTATTTGGCTCTTTGCAAATGCTCATCGCTACACAGCTTGGCTTGCCTGAAGTGCTTTTCTTA GCGGCCAACACTTCAGGGGGTGTTGTGGGTAAAATGATAAGCCCTCAAAGTATCGCTATCGCTTGTGCGGCGGTGGGGTT AGTGGGGAAAGAGAGCGAATTGTTCAGATTTACGGTAAAATACTCTGTCGCTTTGGCGATCATTATGGGGATTGTCTTCA CTCTTATTGCTTATGTCTTCCCCTTTATTATTCCAGTTACTCCTACTTAA Protein sequence : MEFYQVYDPLGHIWLSALVALSPIVLFFISLIVFKLKGYSAGFLSLLLSILIALFVYKMPAQMVSASFFYGFLYGLWPIA WIVIAAIFLYNLSVKSGYFEILKESILTLTPDHRILVILIGFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCL IANTAPVAFGAVGIPITAMASVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFRGIRETFPAVAVTGFSFAIAQFLS SNYLGPQLPDIISALVSLISTTLFLKFWQPKRIFTSNGKEPTINTEKHHICKVVVAWMPFVLLTITIIIWTQPWFKALFK EGGALAFSSFAFEFNSISQKIFKTVPIVTEATNFPVVFKFPLILTTGTSIFLAALLSVFLLRVKISDAIGVFGATLKEMR LPILTIGVVLAFAYVANYSGMSATLALALADTGHVFTFFSPVVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFL AANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSVALAIIMGIVFTLIAYVFPFIIPVTPT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 7e-129 | 56 |
