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Name : Msip34_2834 (Msip34_2834) Accession : YP_003056834.1 Strain : Genome accession: NC_012972 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 2153 - 3346 bp Length : 1194 bp Strand : - Note : PFAM: integrase family protein; KEGG: nmu:Nmul_A2184 phage integrase DNA sequence : ATGGCCCTTACAGACCTCGCAGTAAAGAACGCTGATCCCAAACCCAAGCCCTACAAGCTGACGGATGGCAATGGTCTATA TCTGCTTATTAAGCCATCCGGCAAATACTGGCGCTTCGATTATCGGTTTAACTACAAACGCAAAACCCTCGCTCTTGGCG TGTATCCAGATACAACACTAGCCCATGCCCGAGAAAAACTTGATAAAGCCCGTAAGCTACTCGCCAATGATCCGCCCGTT GATCCAGGTGAGAACCGGAAAGCGGAGCGCGCCTCACGAACCGCCAAAAATGAAAGCTGCTTTGAGGTCATAGCGCGGGA GTGGGTCGCCAGTTATATGCTTAACAAAAGCGACTTACACCGCCAGCGTGTGTTTCGCCGTTTGGAAGTCTTCATGTTTC CTTGGATCGGAGCAGTTTCTATTGATCAGTTAACTGCCCCTGAGATTCTGAAATGCATCCGGCGAATTCAGGCGCAAAAC AAAATAGAGACCGCGCACCGCACATTGCAGGCAACAGGTCAGGTTTTCAGATATGCAGTTCAAACAGGGCGGGCAATACG TGACGTTACGCATGATTTGAGAGGGGCGTTGCCATCGCATAACGTCAAACATATGGCCTCATTCACCGAACCCGAGCAAG TTGCCCAGCTGCTGAAGGCAATAGAAGGCTTCACAGGCTCTTTCACGGTACAGACAGCCCTGAGGTTAGCCCCACTCGTA TTCGTGCGCCCTAGCGAGCTACGCAAGGCAAGATGGGCAGATATTGATCTTGAAAAGAAGGAGTGGCGGTTTAGGGTGAG CAAAACAAACATCGATCACCTGGTGCCGCTCTCAACTCAGGCGGTTGAACTGCTGGAAGGGATCAAGCCTGTATCAGGGC ATGGGGAATGGGTATTTATGGGTGGACACGATCCAAAAAAGCCCATGAGTGCAGCGGCAATCAATGCTGCCTTAAAGAGA ATGGGCTACAACACCCAAACAGAGATAACAGGCCACGGTTTCCGCGCCATGGCCCGAACAATATTGCACGAGCGCTTAAA CTTCGATCCCTACGTTATCGAGCATCAGTTAGCCCACAAAGTCCCCGATGCACTCGGTGCAGCCTACAATCGCACTAAAT TTATCGAGCAGAGAAAAGATATGATGCAAAAATGGGCTGATTTCCTTACATATTTAGTTATACGGGCTGTATGA Protein sequence : MALTDLAVKNADPKPKPYKLTDGNGLYLLIKPSGKYWRFDYRFNYKRKTLALGVYPDTTLAHAREKLDKARKLLANDPPV DPGENRKAERASRTAKNESCFEVIAREWVASYMLNKSDLHRQRVFRRLEVFMFPWIGAVSIDQLTAPEILKCIRRIQAQN KIETAHRTLQATGQVFRYAVQTGRAIRDVTHDLRGALPSHNVKHMASFTEPEQVAQLLKAIEGFTGSFTVQTALRLAPLV FVRPSELRKARWADIDLEKKEWRFRVSKTNIDHLVPLSTQAVELLEGIKPVSGHGEWVFMGGHDPKKPMSAAAINAALKR MGYNTQTEITGHGFRAMARTILHERLNFDPYVIEHQLAHKVPDALGAAYNRTKFIEQRKDMMQKWADFLTYLVIRAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 5e-66 | 42 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 9e-67 | 42 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 4e-67 | 42 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 2e-64 | 41 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 2e-64 | 41 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 2e-64 | 41 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 2e-64 | 41 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 1e-64 | 41 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 2e-64 | 41 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 2e-64 | 41 |
| c5216 | NP_757064.1 | prophage P4 integrase | Not tested | PAI II CFT073 | Protein | 1e-64 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Msip34_2834 | YP_003056834.1 | integrase family protein | VFG0783 | Protein | 9e-65 | 41 |
| Msip34_2834 | YP_003056834.1 | integrase family protein | VFG0598 | Protein | 7e-65 | 41 |
