Gene Information

Name : ECD_03517 (ECD_03517)
Accession : YP_003056086.1
Strain : Escherichia coli BL21(DE3)
Genome accession: NC_012971
Putative virulence/resistance : Virulence
Product : ShiA-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3705688 - 3706731 bp
Length : 1044 bp
Strand : +
Note : -

DNA sequence :
ATGAACGATAGATTATGCTTTGAAGTGCACGATAACCAGGGTTATTTCGTATTTCCGGATACCTGGTTTGGCCCATTGCT
GGGGGAGTTTGAAGAAGTGCTTGATGCATACGACGCTGATGAAATCAGCGAGACGAGTTACATCAACAAACTCCGACGCC
TTGCTCAACGGGAGCCGGACTTTATTGATATACACGTTCATCTGGCATATGCATTTCTGGAACAGAATGCCCCGCGTAAG
GCACTGAACGCCGCTCTTAAAGGACTGGCGGCAGGTAATCGTATCATCCCGGAAAGTTTCTGTGGTGAAATAATCTGGAT
GCATCCCGAAAACCGGCCTTATCTGCGCGCGCTTTATGCAGCAATTCTCGCAAATGTGCACTTACAGCGCCATCAGGATG
CGGTTATGCTCACTGATAAAATACTGGCATACAATCCTGAAGATAATCAGGGGGCTCGCTGGTTGTTGGGTTCAGAGCTG
TTACGCACCGGCGATCATGAGCGAGCCTTCAGTGTACTGAAAGAGCATGCTGATGAATTTTCACCTTACTGGTATGAACT
CGGTCTCCTGCATTTTCTGAACGGGGAACATGTTAAGGCCGCCACAGCTTTTCGCCATGGCTTTGCCACAAACACTTACA
TCGCAGAAATGCTGTGCGGAAATCTGCATCCATTTCCACTTGCTGTGTGGCATGACTTCTCCGGCTCTCTGGATACGGCA
GAAGATTACTATGCAACATACTCACCATTATGGGGACAATATCCGGAAGCATTGCTGTTTGTAAACTGGCTCTATAATCA
TTCCTCTGTGCTGCATGAACGGGCAGAAATCATTAAATGCGCCGAAATGCTGATGCAGGAAGATGATTTCGAAATATGCG
AAAGTATTTTAAGACAGCAGGAGAAGTTGCGTGAAAGAATTGATGAGACGCTTTCTGAGAAAATTGTACAGAAATGCAGA
AATATGAATGGTGAATATGTCTGGCCCTGGATATTGCCGTTTTCAGCGGCAGGCATGAAACATACTGGCATACAGTATCA
GTAG

Protein sequence :
MNDRLCFEVHDNQGYFVFPDTWFGPLLGEFEEVLDAYDADEISETSYINKLRRLAQREPDFIDIHVHLAYAFLEQNAPRK
ALNAALKGLAAGNRIIPESFCGEIIWMHPENRPYLRALYAAILANVHLQRHQDAVMLTDKILAYNPEDNQGARWLLGSEL
LRTGDHERAFSVLKEHADEFSPYWYELGLLHFLNGEHVKAATAFRHGFATNTYIAEMLCGNLHPFPLAVWHDFSGSLDTA
EDYYATYSPLWGQYPEALLFVNWLYNHSSVLHERAEIIKCAEMLMQEDDFEICESILRQQEKLRERIDETLSEKIVQKCR
NMNGEYVWPWILPFSAAGMKHTGIQYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec34 AAW51717.1 Aec34 Not tested AGI-3 Protein 2e-154 99
shiA AAD44731.1 ShiA Virulence SHI-2 Protein 6e-151 97
shiA NP_839237.1 hypothetical protein Virulence SHI-2 Protein 8e-151 97
shiA NP_709438.1 hypothetical protein Virulence SHI-2 Protein 8e-151 97
shiA AFX83956.1 ShiA family protein Not tested SE-PAI Protein 7e-141 91
c3557 NP_755432.1 ShiA-like protein Not tested PAI I CFT073 Protein 1e-137 87
ECUMN_3323 YP_002414005.1 SHI-2 pathogenicity island protein Virulence Not named Protein 1e-138 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECD_03517 YP_003056086.1 ShiA-like protein VFG0599 Protein 3e-151 97
ECD_03517 YP_003056086.1 ShiA-like protein VFG1694 Protein 5e-138 87