Gene Information

Name : yghF (ECD_02839)
Accession : YP_003055414.1
Strain : Escherichia coli BL21(DE3)
Genome accession: NC_012971
Putative virulence/resistance : Virulence
Product : secretion pathway protein, C-type protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2972371 - 2973201 bp
Length : 831 bp
Strand : -
Note : similar to b2970

DNA sequence :
ATGTTCTGGCTGATGCTGCTTATTATTTCTGCAAAAGTGGCGCATTCACTCTGGCGCTATTTCTCCTTTTCTGCGGAATA
TACGGCGGTTTCCCCATCGGCGAATAAACCGCCCCGTGCAGATGCAAAAACGTTCGATAAAAATGACGTGCAATTAATCA
GCCAGCAAAACTGGTTTGGCAAATATCAGCCCGTCGCCGCACCGGTAAAACAACCTGAACCTGTGCCTGTGGCAGAAACA
CGTCTTAATGTGGTGCTGCGCGGGATCGCCTTTGGTGCCAGACCTGGCGCGGTTATTGAAGAAGGTGGCAAACAGCAGGT
CTATTTGCAGGGGGAACGGCTTGGTTCTCACAACGCGGTGATTGAGGAAATCAACCGCGACCATGTGATGCTGCGCTATC
AGGGAAAAATAGAGCGCCTGAGCCTGGCTGAAGAGGAGCGTTCCACCGTTGCCGTGACCAACAAAAAAGCTGTCAGTGAC
GAAGCAAAGCAAGCTGTTGCTGAACCTGCTGTCAGTGCGCCAGTTGAGATCCCGACTGCCGTGCGTCAGGCACTGGCGAA
AGATCCGCAGAAAATTTTTAACTATATCCAGCTTACGCCTGTGCGTAAGGAGGGGATTGTCGGTTATGCAGTGAAGCCGG
GGGCAGATCGTTCTCTGTTCGATGTCAGCGGTTTCAGGGAAGGCGATATCGCCATTGCGCTAAATCAGCAGGATTTCACT
GATCCACGAGCAATGATTGCTCTGATGCGGCAGTTACCTTCAATGGATTCCATTCAACTTACGGTTTTACGCAAGGGTGC
GCGCCACGACATTTCCATCGCGCTGCGCTAA

Protein sequence :
MFWLMLLIISAKVAHSLWRYFSFSAEYTAVSPSANKPPRADAKTFDKNDVQLISQQNWFGKYQPVAAPVKQPEPVPVAET
RLNVVLRGIAFGARPGAVIEEGGKQQVYLQGERLGSHNAVIEEINRDHVMLRYQGKIERLSLAEEERSTVAVTNKKAVSD
EAKQAVAEPAVSAPVEIPTAVRQALAKDPQKIFNYIQLTPVRKEGIVGYAVKPGADRSLFDVSGFREGDIAIALNQQDFT
DPRAMIALMRQLPSMDSIQLTVLRKGARHDISIALR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspC CAE85235.1 GspC, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-118 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yghF YP_003055414.1 secretion pathway protein, C-type protein VFG2046 Protein 4e-118 95