Gene Information

Name : ECD_02832 (ECD_02832)
Accession : YP_003055407.1
Strain : Escherichia coli BL21(DE3)
Genome accession: NC_012971
Putative virulence/resistance : Virulence
Product : type II secretion protein GspJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2965556 - 2966119 bp
Length : 564 bp
Strand : -
Note : -

DNA sequence :
GTGGCAATTGCCATTTTTGCCTCGCTGGCACTGATGGCGCAGCAGGTGACTAACGGCGTCACGCGCGTGAATAGCGCCGT
CGCCGGACACGATCAAAAACTAAACCTCATGCAGCAAACGATGAGTTTTCTGACCCACGATCTGACACAAATGATGCCGC
GTCCGGTAAGAGACGATCAGGGCCAGCGTGAACCAGCGTTACTGGCTGGCGCTGGCGTGCTGGCGTCTGAGAGTGAAGGG
ATGCGCTTTGTGCGCGGCGGTGTGGTTAACCCGTTGATGCGTCTGCCACGCAGTAATCTGCTCACCGTCGGTTACCGCAT
TCATGACGGCTATCTCGAACGGTTAGCCTGGCCGCTGACCGACGCAGCAGGCAGCGTGAAGCCGACAATGCAAAAGTTGA
TTCCGGCGGATTCGCTCCGTTTGCAGTTCTACGACGGCACGCGCTGGCAGGAGAGCTGGTCGTCAGTACAGGCGATCCCT
GTGGCGGTACGCATAACCCTGCATTCGCCGCAATGGGGCGAAATTGAACGCATCTGGTTGTTACGCGGGCCGCAATTATC
ATGA

Protein sequence :
MAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLTHDLTQMMPRPVRDDQGQREPALLAGAGVLASESEG
MRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDGTRWQESWSSVQAIP
VAVRITLHSPQWGEIERIWLLRGPQLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspJ YP_854401.1 type II secretion protein GspJ Not tested PAI I APEC-O1 Protein 2e-82 98
gspJ CAE85228.1 GspJ, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-82 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECD_02832 YP_003055407.1 type II secretion protein GspJ VFG2053 Protein 2e-83 98