Gene Information

Name : ECD_02831 (ECD_02831)
Accession : YP_003055406.1
Strain : Escherichia coli BL21(DE3)
Genome accession: NC_012971
Putative virulence/resistance : Virulence
Product : type II secretion protein GspK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2964582 - 2965517 bp
Length : 936 bp
Strand : -
Note : -

DNA sequence :
GTGCTGGTATTGCTGGCGGTTATGATGCTGGTGACCATCACGCTTTCCGGGCGAATGCAGCAACAACTTGGGCGAACGCG
CAGCCAGCAGGAGTACCAGCAGGCGCTGTGGTACAGCGCCAGTGCGGAAAGCCTGGCGTTGAGCGCACTCAGTCTGAGCC
TGAAAAATGAAAAGCGCGTGCATCTGGCGCAGCCGTGGGCTTCCGGCCCTCGTTTTTTCCCACTGCCGCAGGGGCAAATC
GCCGTCACTCTGCGTGACGCACAGGCCTGCTTTAACCTGAATGCTCTCGCTCAGCCGACGACGGCGTCGCGTCCTATCGC
GGTACAACAACTGATTGCCCTGATCACGCGCCTGGATGTGCCTGCTTATCGGGCCGAACTGATAGCCGAAAGCCTGTGGG
AGTTTATTGACGAAGACCGCAGCGTGCAGACGCGTCTGGGGCGTGAAGACAGCGAGTATCTCGCCCGCTCGGTGCCGTTC
TACGCCGCCAATCAACCGCTGGCCGATATCAGTGAGATGCGCGTGGTACAGGGAATGGACGCCGGGCTTTATCAAAAACT
GAAACCGCTGGTCTGTGCGCTGCCGATGACCCGCCAGCAAATCAACATCAATACCTTAGACGTCACGCAAAGTGTGATTC
TTGAGGCGCTGTTTGACCCGTGGTTAAGCCCTGTTCAGGCGCGGGTGTTATTACAACAACGTCCGGCGAAGGGCTGGGAA
GATGTCGATCAGTTTCTTGCACAGCCGCTACTCGCTGACGTCGATGAGCGTACTAAAAAACAGCTAAAAACCGTCCTGAG
CGTGGACAGCAATTACTTCTGGCTGCGTTCAGATATCACCGTGAATGAGATTGAACTGACGATGAATTCGTTAATTGTCC
GCATGGGCCCACAACACTTTTCTGTTCTCTGGCATCAGACAGGAGAAAGTGAGTGA

Protein sequence :
MLVLLAVMMLVTITLSGRMQQQLGRTRSQQEYQQALWYSASAESLALSALSLSLKNEKRVHLAQPWASGPRFFPLPQGQI
AVTLRDAQACFNLNALAQPTTASRPIAVQQLIALITRLDVPAYRAELIAESLWEFIDEDRSVQTRLGREDSEYLARSVPF
YAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQININTLDVTQSVILEALFDPWLSPVQARVLLQQRPAKGWE
DVDQFLAQPLLADVDERTKKQLKTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQTGESE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspK YP_854400.1 type II secretion protein GspK Not tested PAI I APEC-O1 Protein 9e-124 99
gspK CAE85227.1 GspK, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-124 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECD_02831 YP_003055406.1 type II secretion protein GspK VFG2054 Protein 7e-124 99