Gene Information

Name : ECD_02827 (ECD_02827)
Accession : YP_003055403.1
Strain : Escherichia coli BL21(DE3)
Genome accession: NC_012971
Putative virulence/resistance : Virulence
Product : Polysialic acid transport ATP-binding KpsT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2960358 - 2961017 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence : 
TTGACAAAGTCATATCGTACCCCAACGGGGCGACACTATGTGTTTAAGGATTTAAACCTCGAAATCCCTTCAGGAAAAAG
CGTTGCCTTTATTGGTCGCAACGGTGCGGGTAAATCAACGTTGCTAAGAATGATTGGTGGTATTGACCGCCCCGACAGTG
GAAAGATCATCACCAATAAAACAATATCATGGCCAGTCGGCCTCGCCGGTGGATTTCAGGGAAGTTTAACTGGACGCGAG
AACGTAAAATTTGTTGCGCGGTTATACGCGAAGCAAGAAGAACTGAAAGAGAAAATTGAGTTTGTTGAAGAATTTGCCGA
GCTCGGTAAGTACTTTGATATGCCGATTAAAACTTACTCATCTGGTATGCGATCGCGTTTAGGCTTTGGTTTAAGCATGG
CATTTAAGTTTGATTATTATATCGTCGATGAAGTAACCGCAGTCGGTGATGCCAGGTTTAAAGAAAAATGCGCTCAATTG
TTTAAAGAAAGGCATAAAGAATCTAGTTTTTTAATGGTTTCACATAGTTTGAATTCATTGAAAGAGTTTTGCGATGTGGC
CATTGTATTTAAAAATGATAACGCGGTTAGTTTTTATGAAGATGTTCAGGGCGGGATAGAGGAGTATAGGTGTGATGGTA
TATTAAATCCATTACCATAA

Protein sequence : 
MTKSYRTPTGRHYVFKDLNLEIPSGKSVAFIGRNGAGKSTLLRMIGGIDRPDSGKIITNKTISWPVGLAGGFQGSLTGRE
NVKFVARLYAKQEELKEKIEFVEEFAELGKYFDMPIKTYSSGMRSRLGFGLSMAFKFDYYIVDEVTAVGDARFKEKCAQL
FKERHKESSFLMVSHSLNSLKEFCDVAIVFKNDNAVSFYEDVQGGIEEYRCDGILNPLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 4e-70 72
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-66 71
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 3e-39 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECD_02827 YP_003055403.1 Polysialic acid transport ATP-binding KpsT VFG1449 Protein 7e-67 71
ECD_02827 YP_003055403.1 Polysialic acid transport ATP-binding KpsT VFG0696 Protein 3e-41 45
ECD_02827 YP_003055403.1 Polysialic acid transport ATP-binding KpsT VFG0258 Protein 1e-39 43
ECD_02827 YP_003055403.1 Polysialic acid transport ATP-binding KpsT VFG2563 Protein 1e-36 42