Gene Information

Name : insD (ECD_01904)
Accession : YP_003054527.1
Strain : Escherichia coli BL21(DE3)
Genome accession: NC_012971
Putative virulence/resistance : Unknown
Product : IS2 insertion element transposase InsAB'
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1972901 - 1973557 bp
Length : 657 bp
Strand : -
Note : similar to b1996

DNA sequence :
ATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACC
GCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCT
GCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACT
ACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTC
GTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGAC
TTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGAC
TACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATG
GCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACA
GATGTCTGGAAATATAG

Protein sequence :
MPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVT
TGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRD
YISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4061 NP_839230.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 6e-100 100
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 1e-99 99
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 1e-99 99
S3189 NP_838472.2 insertion element IS2 transposase InsD Not tested SHI-1 Protein 3e-98 99
S4050 NP_839218.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 1e-99 99
SF3708 NP_709447.1 IS2 transposase TnpB Not tested SHI-2 Protein 1e-99 99
SF3721 NP_709460.1 IS2 transposase TnpB Not tested SHI-2 Protein 1e-99 99
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 3e-97 97
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 2e-97 97
insD YP_002414033.1 insertion element IS2 transposase InsD Not tested Not named Protein 4e-97 97
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 3e-94 95
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 1e-90 86
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 4e-64 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insD YP_003054527.1 IS2 insertion element transposase InsAB' VFG0649 Protein 4e-100 99
insD YP_003054527.1 IS2 insertion element transposase InsAB' VFG0621 Protein 4e-100 99
insD YP_003054527.1 IS2 insertion element transposase InsAB' VFG0608 Protein 4e-100 99
insD YP_003054527.1 IS2 insertion element transposase InsAB' VFG1732 Protein 2e-97 97