Gene Information

Name : insF-1 (ECD_01028)
Accession : YP_003053694.1
Strain : Escherichia coli BL21(DE3)
Genome accession: NC_012971
Putative virulence/resistance : Unknown
Product : transposase for IS3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1098558 - 1099373 bp
Length : 816 bp
Strand : -
Note : -

DNA sequence :
ATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCA
GTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGG
ATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAG
GCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTA
CGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGG
TCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTG
CAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGA
TTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGG
AAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTG
TTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAA
CAAGAACCTCGCTTAG

Protein sequence :
MCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAK
ASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDAL
QMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATV
FNYIECDYNRWRRHSWCGGLSPEQFENKNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-125 100
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 1e-124 99
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-125 99
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 1e-105 86
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-42 45
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-42 45
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-42 45
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 7e-45 43
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 7e-45 43
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 8e-45 42
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 6e-45 42
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 5e-45 42
unnamed AAF09030.1 unknown Not tested SHI-O Protein 5e-45 42
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 5e-45 42
unnamed AAF09022.1 unknown Not tested SHI-O Protein 2e-45 42
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 9e-45 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insF-1 YP_003053694.1 transposase for IS3 VFG1631 Protein 7e-106 86
insF-1 YP_003053694.1 transposase for IS3 VFG1706 Protein 3e-45 42