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Name : Msip34_2877 (Msip34_2877) Accession : YP_003052628.1 Strain : Genome accession: NC_012970 Putative virulence/resistance : Unknown Product : DNA topoisomerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 26286 - 28058 bp Length : 1773 bp Strand : - Note : KEGG: abn:AB57_0262 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisome DNA sequence : ATGTCCAAAACTCTCATCATTGTTGAATCGCCAACTAAGGCCAAGAAACTCTCCGAGTACCTTGGCTCTGAATATCTTGT TAAAGCCAGTTTCGGTCATGTTAGAGATTTACCTACCAGCAATGGCGAGATCGGCTATCACCCGGAAACCTTCGAACCCA TATACGAGGTCACCGAAAAAGCGAGAACCACCATCAAGGTTCTCAAGGCTGCGGTAAAAGAATGTGACCGTGTGCTTCTT GCCACTGATCCGGATAGAGAAGGGGAGGCAATTTCATGGCACCTTGCAGAACTTCTCGGGCTGCGTAAACGCGAGAGAGT AAAATTCCATGAAATTACTGCCAGCGCCATTCTGAAGGCAATCAATACTCCTTCCGCGATTGATACGTCACTGGTGCGTG CTCAGGAAGCCCGCCGCATTATTGATAGACAAGTTGGCTGGCTTGTTTCAGGACCGCTTACACGGAAAATTGGTCAGCGT GCGAGCGCTGGCCGGGTGCAATCTCCTGCTTTGGCTTTGGTGGTCGAGAGAGAGCGCGAGATCCTCGCGTTTAAAAAAGA AGCTTTTTTCACGGTTGAGGCAGAATTCAGCGAAGAATGGGGAGCCGTTTGGCCTTCCGATGAGCAGCAGTGTAAGGATC GCTCAGTCGCGGAAACGATTGCAGAGAGCAAGCAGTTTAGTGTCCTCGAATACGACCTTAGTAAACTTCATGAAGATCCG CCACCGCCGTTCCGAACATCAAAATTGCTCCAAGCAGCAAGCGTAGTCTTGGGTTTCGACCCAAAACGCACTATGGATCT GGCACAGTCCTTGTTCCAGAAACATGGAGCAATCAGCTATCACCGTACCGACGAGAGCAACATATCTGATGACGCCTATG GAATGATCGTGGAGTATGGCCAGGAGCGGAATTATCCAATGTCCAGCGAAAAACGCACCTGGAAGGGGGTTGTGGCGGCT CAGGAAGCCCATGAGGCAATCAGGCCATCGGATATGAATTATCAACCAGATGAGACAATGACTGCTGATGAGGCAGCATT GTATCGTTTAATTCATTCACGAGCGGTGGCTTCCCAAATGGAGCCTGCCGAATACACTGTAGCTACCGCTACGCTCTCAA ATGAGCAGGGTATTAAATTCAAAGCGCAGTCTAAATCACTTTGCAAACCAGGTTGGCGCGTCCTCGCCGTTCAAGATGAG GAACATGATGACAATCCTTCGCTGAGTCATATCCCAGACCTCAGTGTTGGGCAAATACTTCATTCATCTAATGTAACGGT TTGCGAGCATTCTACTCGACCGCCAAAGCGTTATACGAAAGCCTCGCTTACTAATGCCCTTGAAAGACTTGGCATTGGCC GACCTGCCACCTATGCGAGCATGGTCGATGGGCTTACAGATCGCTCATATGTCCAGGTGGTTGAACGTTTCTTAACGCCT GAGCCTGTAGGATTCGCAATCTATGATGCTTTGAAAGGCGCGTTCTCGTTTATTGAAACCGAGTACACACGAGGGATGGA ATCCGATCTGGATCTCATCGTCAAAGGGGATAAGACCTACAGATCCGTGGTGAGCAGTAAGTATTCTGATTTAACCACGG AACTTGCAAGTTTTGGCGGTGCTGAGATTCCACGGCCAGCACCATCTACCGTTGGTTCCTGCCCTAAATGCGGCAAAGGC ATGGTGCAACGTACTGGATCTAGGGGCCCCTTCCTTGGCTGCTCTGGATACCCTAAATGCAAGGAAACGCAACAACTCCC GAAAGGTGCATAA Protein sequence : MSKTLIIVESPTKAKKLSEYLGSEYLVKASFGHVRDLPTSNGEIGYHPETFEPIYEVTEKARTTIKVLKAAVKECDRVLL ATDPDREGEAISWHLAELLGLRKRERVKFHEITASAILKAINTPSAIDTSLVRAQEARRIIDRQVGWLVSGPLTRKIGQR ASAGRVQSPALALVVEREREILAFKKEAFFTVEAEFSEEWGAVWPSDEQQCKDRSVAETIAESKQFSVLEYDLSKLHEDP PPPFRTSKLLQAASVVLGFDPKRTMDLAQSLFQKHGAISYHRTDESNISDDAYGMIVEYGQERNYPMSSEKRTWKGVVAA QEAHEAIRPSDMNYQPDETMTADEAALYRLIHSRAVASQMEPAEYTVATATLSNEQGIKFKAQSKSLCKPGWRVLAVQDE EHDDNPSLSHIPDLSVGQILHSSNVTVCEHSTRPPKRYTKASLTNALERLGIGRPATYASMVDGLTDRSYVQVVERFLTP EPVGFAIYDALKGAFSFIETEYTRGMESDLDLIVKGDKTYRSVVSSKYSDLTTELASFGGAEIPRPAPSTVGSCPKCGKG MVQRTGSRGPFLGCSGYPKCKETQQLPKGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| top | ACP28824.1 | DNA topoisomerase I | Not tested | AbaR5 | Protein | 5e-110 | 43 |
| topA | ADI24145.1 | DNA topoisomerase I | Not tested | AbaR1 | Protein | 4e-110 | 43 |
