Gene Information

Name : Msip34_0874 (Msip34_0874)
Accession : YP_003050649.1
Strain : Methylovorus glucosetrophus SIP3-4
Genome accession: NC_012969
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 923780 - 925021 bp
Length : 1242 bp
Strand : +
Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor

DNA sequence :
GTGGATCCATTACTCAAGTCTTCCAAACTCAATAACGTGTGCTACGACATTCGCGGCCCGGTATTGGCGCGCGCGCGCGA
AATGGAAGAAGACGGCCACCGCATCATCAAACTGAATATCGGCAACCCGGCGCCGTTTGGTTTTGAAGCACCCGAAGAGA
TTCTGCAGGACGTGATCCACAATATGGATCAGGCGTCCGGTTACACCGATTCCAAGGGCCTGTTTGCCGCCCGCAAAGCC
ATCATGCACTACACCCAGCAGAAGAATATTGCGGGTGTGACCATCGATGACATCATCATCGGCAATGGCGTGTCCGAGCT
CATCGTCATGGCAATGCAGGCACTGCTTAATAATGGCGACCAGATATTGGTGCCCATGCCCGACTATCCATTGTGGACAG
CGGCTGTCACCCTGGCTGGCGGAACGGCCCGCCACTACCTGTGCGATGAAAACACCGGCTGGTTGCCTGATCTCAAGGAT
ATTGAGTCCAAGATCACCGCCAACACGCGCGGCATTGTCATCATCAACCCGAACAACCCGACTGGTGCGCTTTATCCGCG
CGAAACGCTGGAAGGCATTATCGAAATCGCCCGCCATCACGGCCTCGTGATTTTTGCTGACGAGATTTACGACAAGGTGC
TGTATGACGGCAACACGCACACCTCCATCGCCTCACTGGCCGATGATGTGCTGTTTGTGACCTTCAACGGCTTGTCCAAG
AATTACCGTACCTGCGGCTACCGTGCTGGCTGGCTGGTGGTGTCCGGTGAAAAGCGGCATGCCGGTGATTATATTGAAGG
CCTGAACATGCTGGCCTCCATGCGCCTCTGTGCCAACGTGCCGGGGCAATTGGCCATCCAGACCGCGCTGGGCGGCTATC
AGAGCATCAACGATCTGGTGGCCCCGGGCGGACGCCTCTGCAAGCAGCGTGACCTGGCGTATGAGTTGCTGACGGCGATT
CCTGGCGTCACCTGTGAAAAACCAGCGGCTGCCATGTACCTGTTCCCGCGGCTGGACCCCAAGATTTACCCGATCAAGGA
TGACCAGCAGTTCATTCTTGACCTGTTGTTGGAAGAAAAAGTCCTGCTGGTGCAGGGCAGTGGGTTCAACTGGAAAAAAC
CGGATCATTTCCGCGTGGTGTTCCTGCCCAATGTGGATGACCTGACCGAAGCGATCAAGCGTATTGCCCGCTTCCTCGAA
GGCTACCGCAAGAAGCACGGCACAGACAAAATCAGCGCATGA

Protein sequence :
MDPLLKSSKLNNVCYDIRGPVLARAREMEEDGHRIIKLNIGNPAPFGFEAPEEILQDVIHNMDQASGYTDSKGLFAARKA
IMHYTQQKNIAGVTIDDIIIGNGVSELIVMAMQALLNNGDQILVPMPDYPLWTAAVTLAGGTARHYLCDENTGWLPDLKD
IESKITANTRGIVIINPNNPTGALYPRETLEGIIEIARHHGLVIFADEIYDKVLYDGNTHTSIASLADDVLFVTFNGLSK
NYRTCGYRAGWLVVSGEKRHAGDYIEGLNMLASMRLCANVPGQLAIQTALGGYQSINDLVAPGGRLCKQRDLAYELLTAI
PGVTCEKPAAAMYLFPRLDPKIYPIKDDQQFILDLLLEEKVLLVQGSGFNWKKPDHFRVVFLPNVDDLTEAIKRIARFLE
GYRKKHGTDKISA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-110 57
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-110 57
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 5e-110 57
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-110 57