Gene Information

Name : Msip34_0767 (Msip34_0767)
Accession : YP_003050542.1
Strain : Methylovorus glucosetrophus SIP3-4
Genome accession: NC_012969
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 799644 - 799913 bp
Length : 270 bp
Strand : +
Note : TIGRFAM: flagellar biosynthetic protein FliQ; type III secretion protein, HrpO family; PFAM: export protein FliQ family 3; KEGG: mfa:Mfla_1967 flagellar biosynthetic protein FliQ

DNA sequence :

ATGACCCCAGAAGGCGTGATGACCCTGGGCCGCCAGGCCATGGAAGTGACTCTGATGGTATCGGCGCCCATGCTGATCGT
GGTGCTGGTCATCGGCTTGCTGGTCAGTATTTTTCAGGCGGCGACGCAGATCAACGAAACCACCTTGTCGTTCATTCCCA
AACTGGTCGGTGTATTTGCCGTGCTGGTGATCGCGGGCCCGTGGATGCTCAGCGTCATGCTGGACTACATGCGCGCCATC
TTCACCAGCATTCCTTCCCTGGCGGGATAA

Protein sequence :

MTPEGVMTLGRQAMEVTLMVSAPMLIVVLVIGLLVSIFQAATQINETTLSFIPKLVGVFAVLVIAGPWMLSVMLDYMRAI
FTSIPSLAG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
hrcS	AAT96263.1	HrcS	Virulence	S-PAI	Protein	0.007	42
hrcS	AAT96304.1	HrcS	Virulence	S-PAI	Protein	0.007	42
hrcS	AAT96344.1	HrcS	Virulence	S-PAI	Protein	0.007	42

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Msip34_0767	YP_003050542.1	flagellar biosynthetic protein FliQ	VFG2339	Protein	2e-18	67
Msip34_0767	YP_003050542.1	flagellar biosynthetic protein FliQ	VFG2495	Protein	1e-15	61
Msip34_0767	YP_003050542.1	flagellar biosynthetic protein FliQ	VFG2015	Protein	1e-11	48
Msip34_0767	YP_003050542.1	flagellar biosynthetic protein FliQ	VFG2132	Protein	5e-07	44
Msip34_0767	YP_003050542.1	flagellar biosynthetic protein FliQ	VFG1260	Protein	8e-12	43