Gene Information

Name : Msip34_0642 (Msip34_0642)
Accession : YP_003050417.1
Strain : Methylovorus glucosetrophus SIP3-4
Genome accession: NC_012969
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : -
Position : 664918 - 665682 bp
Length : 765 bp
Strand : +
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS

DNA sequence : 
ATGAAATTCAATGTCGTCATCCCCGCCCGGTATGCCAGCTCCCGTCTGCCCGCAAAGCCATTGCTCGACATCGCCGGCAA
GCCGATGGTGATCTGGGTTGTTGAGCGCGCCCTGCAGAGTGGCGCTGAGCAAGTGATTGTGGCGACGGATCATGCCGATA
TACTGCAAGCGGTACAGTCTTATGGATATCAGGCCATCATGACGCGAGAGGATCACCCCTCCGGAACGGATCGTATTGCG
GAGGTGGCGGCACATTTTGGATGGAGTGATGACGCGATAGTTGTCAACGTGCAGGGCGATGAGCCGCTGATCGATCCGCT
ATTGATTAAAGAAGTCGCGACCAACCTGCGCGATCATCCAGAAGCGGCCATGGCAACTGCATGTCATGCCATTCATGATC
GTGAGCAGATATTCAATCCCAATGTCGTCAAAGTAGTGACCGATAAGGATGGGCACGCGCTTTATTTCAGCCGCGCTCCT
ATTCCTTATGCTCGCGATGCTTTCCAGAGCGAGTCTTCACCGGAGGAGATAGTGGCATACCGACATATAGGTATCTATGC
ATATAAGGTGAGTTTCCTTAATGCATATAGTCTTCTTGAAGCCTGTTCCCTGGAGAAAACTGAAATGCTAGAGCAGCTAA
GGGCGCTTTGGCATGGCTATAAGATCAGTGTTGCCGAGACTGCGCATGCTCCCGCTGCCGGGGTAGATACCCCGGCAGAT
CTGGTTAGAGTTCGGATGATGTTGAAAGACGCAGCGGCTGGCTAA

Protein sequence : 
MKFNVVIPARYASSRLPAKPLLDIAGKPMVIWVVERALQSGAEQVIVATDHADILQAVQSYGYQAIMTREDHPSGTDRIA
EVAAHFGWSDDAIVVNVQGDEPLIDPLLIKEVATNLRDHPEAAMATACHAIHDREQIFNPNVVKVVTDKDGHALYFSRAP
IPYARDAFQSESSPEEIVAYRHIGIYAYKVSFLNAYSLLEACSLEKTEMLEQLRALWHGYKISVAETAHAPAAGVDTPAD
LVRVRMMLKDAAAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 5e-43 50
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-42 49
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 1e-42 49