Gene Information

Name : Msip34_0509 (Msip34_0509)
Accession : YP_003050284.1
Strain : Methylovorus glucosetrophus SIP3-4
Genome accession: NC_012969
Putative virulence/resistance : Virulence
Product : prepilin peptidase
Function : -
COG functional category : N : Cell motility
COG ID : COG1989
EC number : 3.4.23.43
Position : 531240 - 532115 bp
Length : 876 bp
Strand : -
Note : PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: mfa:Mfla_2225 Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A

DNA sequence : 
ATGCCCGACGTTATTAGCAATTTTCTTCAGGTATTGCAGGACTCCCCTGCCTTTTTTATTGCCGTTTCTGCCCTGCTCGG
GCTTCTGGTAGGCAGCTTTCTGAATGTCGTCATTCATCGGCTGCCTAAAATGATGGAAGCGGAATGGCGACTGAATTGCC
AGTCACTCGATGGACAGACACCTTCAGAACCTCCGAAAAAATTCAACCTGCTGACTCCACGTTCCAGCTGTCCGCATTGC
GGGCATGCCATCACGGCCATCGAGAACATCCCCTTGATAAGCTACCTGGGCCTGCGCGGCAAATGCCGGGCTTGCAAGGC
ACCTATCAGCTTGCGCTACCCTGCGGTCGAGCTGCTCACCGGCATCTTGACCGCTCTGGTGAGCTGGAAACTAGGCTACG
GCGGCATGACGGTGTTTGCCTGGCTATTTGTTTTTGCATTGATCGCCCTGACCTTCATTGACCTGGATACGCAGCTGCTG
CCTGACGACATTACGCTCCCTTTGCTATGGCTGGGCTTGCTGGTCAATCTCTATGGCGGCTTTACCGACTTATCCTCCGC
CGTGACTGGCGCCGCAGCCGGATATCTCATCCTGTGGAGCATCTATTGGCTGTTCAAGCTGATAACAGGCAAAGAAGGCA
TGGGCTACGGCGACTTCAAATTGCTTGCGGCCATTGGCGCCTGGTTTGGCTGGCAAATGCTGCCCGCCGTCATCCTGCTT
TCCTCACTGGCAGGCTCGGTGATTGGCATAGGCTTGATTCTGTTTGCACGCCATGGTCGCAGCACGCCCATCCCATTTGG
CCCCTACCTGGCATTAGGCGGTATTGCCGCCTTGTTCTTCGGCCCGACCCTGGCAAGCTTTTACCTGGGCAGCTGA

Protein sequence : 
MPDVISNFLQVLQDSPAFFIAVSALLGLLVGSFLNVVIHRLPKMMEAEWRLNCQSLDGQTPSEPPKKFNLLTPRSSCPHC
GHAITAIENIPLISYLGLRGKCRACKAPISLRYPAVELLTGILTALVSWKLGYGGMTVFAWLFVFALIALTFIDLDTQLL
PDDITLPLLWLGLLVNLYGGFTDLSSAVTGAAAGYLILWSIYWLFKLITGKEGMGYGDFKLLAAIGAWFGWQMLPAVILL
SSLAGSVIGIGLILFARHGRSTPIPFGPYLALGGIAALFFGPTLASFYLGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85237.1 putative prepilin peptidase A Not tested PAI V 536 Protein 3e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msip34_0509 YP_003050284.1 prepilin peptidase VFG0114 Protein 4e-60 53
Msip34_0509 YP_003050284.1 prepilin peptidase VFG0234 Protein 8e-43 51
Msip34_0509 YP_003050284.1 prepilin peptidase VFG2428 Protein 1e-45 51
Msip34_0509 YP_003050284.1 prepilin peptidase VFG1882 Protein 8e-52 48