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Name : Msip34_0398 (Msip34_0398) Accession : YP_003050173.1 Strain : Methylovorus glucosetrophus SIP3-4 Genome accession: NC_012969 Putative virulence/resistance : Virulence Product : two component heavy metal response transcriptional regulator, winged helix family Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 409336 - 410016 bp Length : 681 bp Strand : - Note : KEGG: tgr:Tgr7_1208 two component heavy metal response transcriptional regulator, winged helix family; TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver DNA sequence : ATGCGAATTCTTGTAGTCGAGGATGAACACAAAACCGGCGAGTATCTGCGCAAAGGCCTGACCGAGGCAGGTTTTGTCAC GGACCTGATACAGGATGGTCTGGATGGGCAGCATATGGCGCTGGCTGAACATTACGACCTGATCATTCTGGATGTGATGC TGCCACGCGCCAGTGGCTGGCAGATCATCGCTGCCCTGCGTAAGGCGGGCAAGCATACCCCGGTGCTCTTTCTGACGGCA CGTGACCTGGTGGAAGACCGCGTGAAAGGCCTGGAACTGGGCGCCGATGACTATCTGGTCAAACCGTTTGCCTTTTCTGA ATTGCTGGCCCGTATACGCACGCTGTTGCGCCGCGGCAGAACGCGCGAAGCCGATGTGTTGCAGGTCGCCAATCTTGAAG TCGATGTACTACGGCGGCGCGTGCAGCGCGATGGCAAGAAAATCGAGCTCACGGCCAAGGAGTTTGGGCTACTGGAATTG CTGGTGCGTCGGCGTGGCGAGGTGTTATCGCGCTCGCTGATTGCCTCCCAAGTATGGGACATGAATTTTGACAGCGACAC CAATGTGATTGAAGTGGCCATGCGGCGCCTGCGCGCCAAGATTGATGATCCGTTCGAGCCCAAGCTGATTCACACCGTGC GCGGCATGGGCTATGTGCTGGATGTGCCCGAGGCACCATGA Protein sequence : MRILVVEDEHKTGEYLRKGLTEAGFVTDLIQDGLDGQHMALAEHYDLIILDVMLPRASGWQIIAALRKAGKHTPVLFLTA RDLVEDRVKGLELGADDYLVKPFAFSELLARIRTLLRRGRTREADVLQVANLEVDVLRRRVQRDGKKIELTAKEFGLLEL LVRRRGEVLSRSLIASQVWDMNFDSDTNVIEVAMRRLRAKIDDPFEPKLIHTVRGMGYVLDVPEAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 4e-48 | 58 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 2e-47 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Msip34_0398 | YP_003050173.1 | two component heavy metal response transcriptional regulator, winged helix family | BAC0638 | Protein | 1e-55 | 70 |
| Msip34_0398 | YP_003050173.1 | two component heavy metal response transcriptional regulator, winged helix family | BAC0083 | Protein | 2e-55 | 69 |
| Msip34_0398 | YP_003050173.1 | two component heavy metal response transcriptional regulator, winged helix family | BAC0197 | Protein | 7e-58 | 68 |
| Msip34_0398 | YP_003050173.1 | two component heavy metal response transcriptional regulator, winged helix family | BAC0308 | Protein | 2e-55 | 67 |
| Msip34_0398 | YP_003050173.1 | two component heavy metal response transcriptional regulator, winged helix family | BAC0111 | Protein | 5e-57 | 66 |
| Msip34_0398 | YP_003050173.1 | two component heavy metal response transcriptional regulator, winged helix family | BAC0125 | Protein | 3e-55 | 66 |
| Msip34_0398 | YP_003050173.1 | two component heavy metal response transcriptional regulator, winged helix family | BAC0347 | Protein | 2e-49 | 62 |
| Msip34_0398 | YP_003050173.1 | two component heavy metal response transcriptional regulator, winged helix family | HE999704.1.gene1528. | Protein | 1e-25 | 45 |
| Msip34_0398 | YP_003050173.1 | two component heavy metal response transcriptional regulator, winged helix family | AE000516.2.gene3505. | Protein | 1e-22 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Msip34_0398 | YP_003050173.1 | two component heavy metal response transcriptional regulator, winged helix family | VFG0596 | Protein | 1e-48 | 58 |
| Msip34_0398 | YP_003050173.1 | two component heavy metal response transcriptional regulator, winged helix family | VFG1390 | Protein | 1e-32 | 46 |
| Msip34_0398 | YP_003050173.1 | two component heavy metal response transcriptional regulator, winged helix family | VFG1389 | Protein | 1e-24 | 41 |
