Gene Information

Name : hemC (Msip34_0034)
Accession : YP_003049810.1
Strain : Methylovorus glucosetrophus SIP3-4
Genome accession: NC_012969
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 38073 - 39035 bp
Length : 963 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGACTTCGACTTCCCCCATCAGCATCCCAGAAAAACTTGTTATTGCTTCGCGTGAGAGTGCGCTGGCCATGTGGCAGGC
GCGCCACATCCAGGCTCGCTTGCAGGCGCTGTACCCGAGCACGCAGGTGGAGATCCTGGGCATGACCACCACGGGCGATC
AGATTCTGGATTCCCCGCTGGCACGCATTGGTGGCAAGGGGCTGTTTGTGAAGGAGCTGGAGCAAGCATTGGCCGATGGC
CGCGCAGACTTGGCGGTGCATTCGATGAAAGACGTGCCCATGCATTTGCCCGAAGGCTTTGCCATGGCAGCGATAGGCGA
ACGCGAGGATCCACGGGATGCTTTTGTATCGAATGATTACCCATCGCTGGAAGCCTTGCCTGCGGGCAGCATCGTCGGTA
CCTCCAGCCTGCGCCGCCAGAGCCAGTTGCAAGCGCGCTTTCCGCATCTGGTGATTGAGTCCCTGCGCGGCAATCTGCAA
ACCCGCCTGCGCAAACTGGATGAAGGCCAATATGCGGCCATCATTCTGGCAGCCGCAGGCCTGATACGTTTGGGCCTGGG
CAATCGTATTGCGCAAACCATTGCGCCAGAAGACAGTATTCCCGCCGTGGGCCAGGGTGCGCTGGGGATTGAAATCAACG
CAGCGCGTACCGATCTGTTAACGGTATTGGCACCCCTGAACCACGCAGATACAGCCGCCTGCGTGGAAGCCGAGCGCGGC
ATGAGCCGGGCGCTGGCCGGCAGTTGCACGGTGCCGCTGGGGGCTTATGCCACCAAGCAGGGCGAGAACATCACCATCCA
TGGCTTCGTCGCCAGTGTGGATGGCAAGCAGATGCTGCGTGCCGAAGCCACAGGAAATGCGGCCCAGCCTGAACTATTGG
GCCAGCAGCTAGCCCAATCCCTGATTGCAAGGGGCGCAGACAAGATTCTGCAGGCGCTGGCTGAACAAAGCGCGCATGGC
TGA

Protein sequence :
MTSTSPISIPEKLVIASRESALAMWQARHIQARLQALYPSTQVEILGMTTTGDQILDSPLARIGGKGLFVKELEQALADG
RADLAVHSMKDVPMHLPEGFAMAAIGEREDPRDAFVSNDYPSLEALPAGSIVGTSSLRRQSQLQARFPHLVIESLRGNLQ
TRLRKLDEGQYAAIILAAAGLIRLGLGNRIAQTIAPEDSIPAVGQGALGIEINAARTDLLTVLAPLNHADTAACVEAERG
MSRALAGSCTVPLGAYATKQGENITIHGFVASVDGKQMLRAEATGNAAQPELLGQQLAQSLIARGADKILQALAEQSAHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 7e-71 57
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 7e-71 57