Gene Information

Name : Msip34_2492 (Msip34_2492)
Accession : YP_003052256.1
Strain : Methylovorus glucosetrophus SIP3-4
Genome accession: NC_012969
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 2625193 - 2626602 bp
Length : 1410 bp
Strand : +
Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mfa:Mfla_2447 L-glutamine synthetase

DNA sequence :
ATGGCGGTAGCCGACGTAATGAAAATGGTGAAGGAAAATGACATCAAGTTTGTTGATTTCCGTTTCACCGATACCAGAGG
TAAAGAACAGCACGTAACTGTACCCATCTCAGCGTTCGATGAAAGCAAATTTACCGAAGGCCACGCATTCGACGGTTCAT
CTATCGCCGGCTGGAAAGGTATTCAAGCTTCCGACATGCAACTGATGCCTGATCCTGAGACTGCCAATATCGATCCATTC
ATGGACGAACCTACACTGATTCTGAGCTGTGACGTGGTAGATCCTACCGACGGCAAGGGCTACGACCGTTGCCCACGCAG
CTTGGCAAAACGCGCTGAGGCTTACCTGAAGTCCAGCGGCCTGGGCGACACCGCCTACTTCGGCCCAGAACCCGAATTCT
TCATTTTCGACTCCATCCAGTGGAATGCCGGCATGGAAGGCTGTTCCGTCAAGATCAACTCCGAAGAAGGTGCATGGGCA
TCTGGCGAGAAGTTCGAAAGCGGCAACACTGGTCACCGTCCTGGCGTAAAGGGCGGCTACTTCCCAGTACCTCCAGTCGA
TTCCTTCCAGGATCTGCGCTCAGCCATGGTCATCGCCCTTGAAAACATGGGCGTGCCTGTTGAAGTGCACCACCACGAAG
TGGCAACGGCTGGTCAATGTGAAATCGGCACCAAGTTCAGCACTCTGGTACAACGTGCCGACTGGACCCAATTGCTGAAG
TACGTGGTGCTGAACACCGCTCACGCTTACGGCAAAACCGCCACCTTCATGCCTAAGCCTATCGTTGGCGACAACGGTTC
CGGCATGCACGTGCACCAATCCGTATGGAAAGATGGCAAGAACCTGTTCGCAGGCAACGGCTACGCTGGCCTGTCCGAGT
TCGCCCTTTACTACATCGGCGGTATCATCAAGCACGCTCGCGCGCTGAATGCGATCACCAATCCAGGCACCAACTCCTAC
AAGCGTCTGGTTCCAGGCTTTGAAGCTCCAGTTAAGCTGGCCTACTCTGCCAAGAACCGTTCAGCTTCGATCCGTATTCC
TTTCGTGCACTCCGACAAGGCTCGCCGCGTTGAAGCTCGCTTCCCTGATCCTACTGCCAACCCATACCTGGCATTCAGCG
CCCTGCTGATGGCTGGTCTGGACGGCGTACAGAACAAGATTCACCCAGGTGAGCCAGCAACCAAGGATCTCTACCATCTG
CCTCCTGAGGAAGATGCAGCGATCCCAACCGTTTGCTCCTCGCTGGAACAAGCACTGGAATATCTGGACAAGGATCGCGA
GTTCCTCACCCGTGGTGGTGTGTTCTCCGATGACTGGATCGACAGCTACATCGCATTGAAGATGGAAGAAGTCACCAGAA
TGCGCATGACACCGCATCCTATCGAGTTCGCCATGTACTACAGCTGCTAA

Protein sequence :
MAVADVMKMVKENDIKFVDFRFTDTRGKEQHVTVPISAFDESKFTEGHAFDGSSIAGWKGIQASDMQLMPDPETANIDPF
MDEPTLILSCDVVDPTDGKGYDRCPRSLAKRAEAYLKSSGLGDTAYFGPEPEFFIFDSIQWNAGMEGCSVKINSEEGAWA
SGEKFESGNTGHRPGVKGGYFPVPPVDSFQDLRSAMVIALENMGVPVEVHHHEVATAGQCEIGTKFSTLVQRADWTQLLK
YVVLNTAHAYGKTATFMPKPIVGDNGSGMHVHQSVWKDGKNLFAGNGYAGLSEFALYYIGGIIKHARALNAITNPGTNSY
KRLVPGFEAPVKLAYSAKNRSASIRIPFVHSDKARRVEARFPDPTANPYLAFSALLMAGLDGVQNKIHPGEPATKDLYHL
PPEEDAAIPTVCSSLEQALEYLDKDREFLTRGGVFSDDWIDSYIALKMEEVTRMRMTPHPIEFAMYYSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-107 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msip34_2492 YP_003052256.1 glutamine synthetase VFG1399 Protein 1e-108 52