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Name : Msip34_0230 (Msip34_0230) Accession : YP_003050006.1 Strain : Methylovorus glucosetrophus SIP3-4 Genome accession: NC_012969 Putative virulence/resistance : Virulence Product : Fis family two component sigma54 specific transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 255855 - 257186 bp Length : 1332 bp Strand : - Note : PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; AAA ATPase; KEGG: mfa:Mfla_0214 two component, sigma54 specific, fis family transcriptional regulator DNA sequence : ATGGCTAACCCACTCAACTGCCTCGTCGTGGATGATGAACACGACATCCGCGAACTGATCGTCATGACACTGACACGCAT GGGCCTTAAGGCCGATAGTGCAGCCAACCTGGACGATGCCAAATTCATGCTGCGGCAAAAATCCTACGCCCTGTGCCTGA CCGATATGCGGCTGCCCGACGGCAATGGGCTGGACCTGGTGCGCTATATCAATCAGCACCATGCCGGGTTGCCAGTCGCA GTGATTACCGCTTACGGCAGCGCCGATAATGCGGTCTCCGCCCTCAAGGCAGGCGCCTTTGATTACATTACCAAACCCAT TTCGCTGCAACAATTGCGACCCCTGGTGCAATCCGCGCTCAACCTGCCAAATGCTGCCGGCAATGTCAGCGGCCCCAGTC TGGTGGGGGAGTCCACGGCGCTGCAACAGATACGCGCCACCATCACCAAGCTTTCCCGCAATCAGGCGCCCGTCTTCATC AGCGGCGAGGCCGGAACCGGAAAATCGCTGGTTGCGCGTCTTATCCATCAGTCCAGCTCGCGCCAGAGCGGCGCATTCAT TACCCTGGACTGCAGCGCCATCCCCGAGCAGCAGCTGGAAAAAGAAATCTTTGGTGAAGAAGATGAACCTGGCGCACTGC AGAAAGCCTCCGGTGGCACGCTTTTCTTCAAGGAGATTGCCGCCCTGCCGCTGGCCAGCCAGGTGCGCCTGCTGCGTGCC ATTCAGGATAAATCGATTTCCATCCCCGGGCAGCGCAAGGAAGAAACCATCGATGTCCGCATCATCAGTGCTTCCCAGCG CAACCTGACCGCCATGATGGAGCGCGGCCAGTTTCGCCAGGACCTCTATTACCGGCTCAATGTGATCGCGCTGGACCTGC CCGCCCTGCGCGATATTCCCGAAGATATTGCCGCTATCAGCCAATACCTGCTCAAACGCCTGTGCCAGAGCCAGAAGATA GATGTTCCGCTGATCGCACGCGAAACCCAGCAAATGCTGCTACAGCACTATTACCCGGGCAATGTGCGGGAGCTGGAAAC GATACTGGAACGTGCACTCACCTTGCATGATGGGCGCAGCCTGCAGCCCTCTGACCTGCGCCTGCAAACCGAAAGCAAGC GGGTTGCGCTGGAAATTGAAGCCAATGGCCTGCCCCTGCCAGACTATCTGGAAAGCATAGAAAAGCAGGCGATTCTGAAC GCGCTGGAAAGAACCGGCCATAACAAGACGGCTGCCGCCAAGTTGCTCGGCGTCAGCTTTCGCACCCTGCGCTATCGCCT TTCCAAGCTGGGCTTGGGTAAAGACAGCGATGGGGATGATGACGAGGATTAA Protein sequence : MANPLNCLVVDDEHDIRELIVMTLTRMGLKADSAANLDDAKFMLRQKSYALCLTDMRLPDGNGLDLVRYINQHHAGLPVA VITAYGSADNAVSALKAGAFDYITKPISLQQLRPLVQSALNLPNAAGNVSGPSLVGESTALQQIRATITKLSRNQAPVFI SGEAGTGKSLVARLIHQSSSRQSGAFITLDCSAIPEQQLEKEIFGEEDEPGALQKASGGTLFFKEIAALPLASQVRLLRA IQDKSISIPGQRKEETIDVRIISASQRNLTAMMERGQFRQDLYYRLNVIALDLPALRDIPEDIAAISQYLLKRLCQSQKI DVPLIARETQQMLLQHYYPGNVRELETILERALTLHDGRSLQPSDLRLQTESKRVALEIEANGLPLPDYLESIEKQAILN ALERTGHNKTAAAKLLGVSFRTLRYRLSKLGLGKDSDGDDDED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 2e-85 | 42 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 2e-85 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Msip34_0230 | YP_003050006.1 | Fis family two component sigma54 specific transcriptional regulator | VFG1214 | Protein | 3e-99 | 50 |
