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Name : Msip34_1817 (Msip34_1817) Accession : YP_003051587.1 Strain : Methylovorus glucosetrophus SIP3-4 Genome accession: NC_012969 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1926197 - 1928776 bp Length : 2580 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGACCACCACTGCTGTCGATACGCCAAGCCCATCTGCTGAAAATCATACGCCCATGATGCGCCAATATCTGGGGATCAA GGCGCAATATCCTGACATGCTGCTGTTTTATCGCATGGGCGATTTTTATGAACTGTTCCATGATGATGCCGAGAAAGCCG CCAGGCTGCTGGGCATTACCCTCACCAAGCGTGGCGCATCTAATGGCGAGCCCATCCGCATGGCCGGTGTGCCTTATCAT GCCGCTGAGCAATACCTGGCCAAACTGGCCAAACTGGGCGAGGCGGTGGCGATTTGCGAGCAGATCGGTGACCCCGCCAA GAGCAAAGGTCCGGTAGAGCGGCAAGTCACGCGCATCCTGACACCAGGCACCCTCACCGATAGTGCCTTGCTGGATGACA CTCGCGATAATCTGCTGGTCGCCGTATCGGCCGGAGAGGGGATTGTCGGTCTCGCCCGCATTAACCTGGCTGCTGGGCAG CTGGTGCTCACCGAAGTCGCCCCTGGCCTGCTGGCGCAGGAGCTGGAGCGTATTTCTCCTGCTGAATTGCTGCTGGCCGA TGGATACCAGCACCCCAGCATTGAAGCGCTGAAATGCCCGAAAAAACGCCTGGCGCCATGGCAATTTGATCTCGACTCCG CCACGCAATTGCTGACGCAACAATTCAATACGCATGACCTCGCTGGCTTTGGCTGTGCCGATCTCACCCAAGCCATCTCG GCCGCAGGGGCGTTGCTGGATTACGTAAGGCATACCCAACGCAGTAGCCTGCCGCATATCAATGCCTTGTCGGTGGAGCA GAGCGGCGAATATATTCAGTTTGATGCTGCGAGCCGCCGTAACCTAGAGATAGACCAAACCCTGCGTGGCGAACCCGCGC CCACCCTGTATTCACTGCTGAATACCTGCCGCACCGCCATGGGCGCACGCTTGCTACGGCACTGGCTGCATCACCCACTG CGGGATCATGCGGCGATACAGGCGCGCCTGGAGGCGGTTGCTGCGCTATTGCAAGGCGATGCTCTGCAAGCCCCCCGGCG CCTGCTCAACAACATTGGCGATATCGAACGCATTACCGCGCGCGTGGCCTTGAAAAGCGCGCGTCCACGCGATCTTTCCG GTCTGCGCGATAGCCTGCAGCAATTACCGGAACTTCAGCAGTCCCTGGCAGGTTTGCCATCCGCGCTATTGCAGCAGGCG ATGGCCTTGCTGCAGCCGCCCGCTGAGGTGACATCCTTGCTTGCTGCAGCCATACGCCCCGAGCCCTCATCCGTGCTGCG TGAGGGCGGGGTGATTGCCGATGGCTATGATGCCGAGCTGGATGAGCTGCGTGGCATACAAACCAATTGTGGTGAATTCC TGCTCAAATTTGAGGCAGAAGAGCGCGCCCGCACCGGCTTGGCCAACCTCAAGGTGGAATACAACAGCGTGCATGGTTTT TACATTGAAATCAGCCGCGCGCAAGCCGAGCATGCCCCTGCCGAATACCGCCGCCGGCAGACGCTCAAAAACGCCGAGCG TTTTATTACGCCCGAGCTCAAGACCTTTGAAGACAAAGTGCTCTCCGCCAATGAGCGTGCGCTGGCGCGCGAAAAAGCCC TTTATGATGCTTTACTTGATGCGCTGGCGCCCTATATTCAAGCCCTGCAAGCCAATGCCCACGCCGTGGCCCAGCTGGAT GTTATCGCCACCTTTGCCGAGCGCGCTCAGGCTCTGAACTATGTGCAGCCGGAATTTACCGCTGAAGCGGGTATTCAGAT CACCGCTGGCCGTCACCCGGTGGTGGAGCAACTGGCGCAACCCTTTATCGCCAACGATGTGCAGCTCACGCCATATCGGC AGTTGCTGCTGATCACCGGCCCCAATATGGGCGGTAAATCGACCTATATGCGGCAGACAGCGCTGATTGTGCTGCTGGCA CATTGCGGTTGCTTTGTCCCCGCCAAGGCCGCGCGTATCGGGCAGGTAGACCGCATCTTTACCCGCATAGGCGCTTCGGA TGACCTGGCCGGTGGTCGTTCGACCTTCATGGTGGAAATGACCGAAACCGCCAATATCCTGCATAACGCCACCGAGCACA GCCTGGTTTTGCTGGATGAAATCGGGCGGGGCACCTCGACGTTCGACGGCCTCTCGCTGGCCTGGGCCGTCGCCCGCCAA CTGCTGGAGCGCAATCGCAGCTACACTTTGTTTGCTACACATTACTTTGAACTGACGCGGCTCGTGGAAGATTTCAAGCA AGCCGCCAATGTGCATCTGGATGCTGTAGAACATGGCAATGGCATCGTCTTCCTGCACGCCGTGCAAGAGGGGCCAGCCA GCCAGAGTTACGGTCTGCAAGTCGCCCAACTGGCGGGTATTCCACGCTCCGTTGTCAATGCAGCCAAACGCAAACTGGTG CAACTTGAGCAGCAGAATATACAGGCAGGCCCGCAAAGCGATATGTTCAGCCAGCAGGCTGCCGCCGAGCCTCATGTGGA AGTATCGCCCGCACTGGCTGAACTGGAGCGCCTTGATCCTGATGATCTGACGCCCAAGCAGGCGCTGGAGGCTTTATACC GGTTGCGAGGAATGCTTTGA Protein sequence : MTTTAVDTPSPSAENHTPMMRQYLGIKAQYPDMLLFYRMGDFYELFHDDAEKAARLLGITLTKRGASNGEPIRMAGVPYH AAEQYLAKLAKLGEAVAICEQIGDPAKSKGPVERQVTRILTPGTLTDSALLDDTRDNLLVAVSAGEGIVGLARINLAAGQ LVLTEVAPGLLAQELERISPAELLLADGYQHPSIEALKCPKKRLAPWQFDLDSATQLLTQQFNTHDLAGFGCADLTQAIS AAGALLDYVRHTQRSSLPHINALSVEQSGEYIQFDAASRRNLEIDQTLRGEPAPTLYSLLNTCRTAMGARLLRHWLHHPL RDHAAIQARLEAVAALLQGDALQAPRRLLNNIGDIERITARVALKSARPRDLSGLRDSLQQLPELQQSLAGLPSALLQQA MALLQPPAEVTSLLAAAIRPEPSSVLREGGVIADGYDAELDELRGIQTNCGEFLLKFEAEERARTGLANLKVEYNSVHGF YIEISRAQAEHAPAEYRRRQTLKNAERFITPELKTFEDKVLSANERALAREKALYDALLDALAPYIQALQANAHAVAQLD VIATFAERAQALNYVQPEFTAEAGIQITAGRHPVVEQLAQPFIANDVQLTPYRQLLLITGPNMGGKSTYMRQTALIVLLA HCGCFVPAKAARIGQVDRIFTRIGASDDLAGGRSTFMVEMTETANILHNATEHSLVLLDEIGRGTSTFDGLSLAWAVARQ LLERNRSYTLFATHYFELTRLVEDFKQAANVHLDAVEHGNGIVFLHAVQEGPASQSYGLQVAQLAGIPRSVVNAAKRKLV QLEQQNIQAGPQSDMFSQQAAAEPHVEVSPALAELERLDPDDLTPKQALEALYRLRGML |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Msip34_1817 | YP_003051587.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 56 |
