Gene Information

Name : Msip34_1756 (Msip34_1756)
Accession : YP_003051528.1
Strain : Methylovorus glucosetrophus SIP3-4
Genome accession: NC_012969
Putative virulence/resistance : Virulence
Product : redoxin domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 1869964 - 1870467 bp
Length : 504 bp
Strand : +
Note : PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mfa:Mfla_1240 thiol peroxidase (atypical 2-Cys peroxiredoxin)

DNA sequence :
ATGACCAGCACAGTAACGCTTAAAGGCAACCCTGTAACCGTAGCTGGCGACTTCCCAAAAGTCGGCCAGACCGCCCCTGA
CTTTCAATTGGCCAACGCCAAGCGCGAATTGCAATCCCTGGCTGACTACGCCGGCAAGCGCAAAGTACTGAACATTTTCC
CAAGTGTGGATACCCCCACTTGCGCCACCTCGGTTCGCACGTTCAACAAGCGTGCCGCTGAAGTGCCCAACACCGCCGTG
CTCTGCATCTCCGCTGACCTGCCTTTCGCGCAAAGCCGTTTCTGCGGTGCAGAAGGCCTGGAAAATGTAGTGACCCTGTC
CACCTTCCGTGACACCGCCAAGTTCTCCAAAGACTACGGCGTGCAAATCGCCGACAGCAGCCTGGCTGGCCTCACCGCCC
GTGCCGTGGTCGTGCTGGATGAAAACAACAAGGTATTGCACAGCGAACTCGTTTCCGAGATCGCCAACGAGCCTGACTAC
GATGCAGCTTTAGCAGTGCTGTAA

Protein sequence :
MTSTVTLKGNPVTVAGDFPKVGQTAPDFQLANAKRELQSLADYAGKRKVLNIFPSVDTPTCATSVRTFNKRAAEVPNTAV
LCISADLPFAQSRFCGAEGLENVVTLSTFRDTAKFSKDYGVQIADSSLAGLTARAVVVLDENNKVLHSELVSEIANEPDY
DAALAVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-34 49
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-34 49
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-34 49
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-34 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msip34_1756 YP_003051528.1 redoxin domain-containing protein VFG0087 Protein 8e-35 49