Gene Information

Name : Msip34_1745 (Msip34_1745)
Accession : YP_003051517.1
Strain : Methylovorus glucosetrophus SIP3-4
Genome accession: NC_012969
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1852595 - 1853284 bp
Length : 690 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1251 ABC transporter related

DNA sequence :
ATGCAGAAACCTTTGGCAGTTGAAGCAGTAAAACTCGATAAACATGTTAACAGTAATGGTAACCCGCTGGTCATCCTGAG
TGGACTGGATCTGGCGATTGCAGCAGCGGAGCGGATTGCCATTGTCGGCAGTTCTGGCTCTGGCAAGTCCACCTTGCTGG
GCTTGCTCGCCGGGTTGGACAACCCCACGCAGGGGAAAGTGCTGATCCAGGGACAGGATATCGCACCGCTGGATGAAGAT
GGACGCGCGGCCCTGCGAGCACGCAGCATGGGCTTTGTGTTTCAGTCGTTTCAACTCTTGCCTACGCTGACGGCGCTGGA
AAATGTCATGCTGCCCTTGCAACTGGCGGGGCGTGACGATGCCAAATCGCAGGCCATGGCCGCGCTGGAGCGTGTCGGGC
TGGCGCATCGCCTCTCGCATTACCCACGTCATCTTTCCGGAGGTGAGCAGCAGCGGGTCGCCATCGCACGGGCATTTGCG
CCGCGACCTGCCATCCTGTTTGCCGATGAGCCCACAGGCAATCTGGATGCGGCCACTGGCGAAAACATCATCGAGCTCCT
GTTTGCGCTCAATGCCGAATCCGGCACTACGCTGGTACTGGTGACACATGATCTCAAGCTGGCGAATCGCTGCGGCCGCG
TGCTGAGCCTGCAGCAGGGCCGTATCGTTGAGCTGGAAGGTGTGGCATGA

Protein sequence :
MQKPLAVEAVKLDKHVNSNGNPLVILSGLDLAIAAAERIAIVGSSGSGKSTLLGLLAGLDNPTQGKVLIQGQDIAPLDED
GRAALRARSMGFVFQSFQLLPTLTALENVMLPLQLAGRDDAKSQAMAALERVGLAHRLSHYPRHLSGGEQQRVAIARAFA
PRPAILFADEPTGNLDAATGENIIELLFALNAESGTTLVLVTHDLKLANRCGRVLSLQQGRIVELEGVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-18 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-19 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-21 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-21 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-21 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msip34_1745 YP_003051517.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-24 53
Msip34_1745 YP_003051517.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-24 45