Gene Information

Name : Msip34_1725 (Msip34_1725)
Accession : YP_003051497.1
Strain : Methylovorus glucosetrophus SIP3-4
Genome accession: NC_012969
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 1827665 - 1828831 bp
Length : 1167 bp
Strand : -
Note : KEGG: sbc:SbBS512_E1203 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase

DNA sequence : 
ATGAAGATAGCAATTGCCGGTACCGGCTACGTAGGACTTTCCATGGCGGTGTTGCTGGCCCAGAAAAACGAAGTGGTCGC
GCTCGACATCGTGCCGGAGAAGGTGGAGATGCTGAACCGCAAGCAATCGCCGATTGCCGATGCCGAGATTGAAGAGTATC
TCGCCACCAAGACCCTGAACTTCAAGGCCACCATGGACAAACAGGCGGCCTATGAGGGCGCTGACTATGTCATCATCGCC
ACGCCGACCGACTACGACCCCGAGACCAACTACTTCAATACCGGCTCGGTAGAAGCCGTGATTCGCGACGTCAAGACCTA
CGCACCGAATGCCGTGATGGTCATCAAGTCCACCATTCCGGTCGGCTTTACTGTTGGTGCCCGAGACAAATACCAGACCA
ATAACCTGATCTTCTCGCCGGAATTTCTGCGGGAAGGCAAAGCGCTTTACGACAACCTCTATCCTTCCCGTATTGTGGTG
GGCGAGAAGTCTGCCCGTGCCGAAACCTTTGCCCGGCTGCTGCAAGAAGGCGCGCTGAAAGAGAATATCCCGCTGCTGTT
TACCGATAGCTCGGAAGCCGAAGCCATCAAGCTGTTTGCCAACACCTATCTCGCCATGCGCGTGGCGTATTTCAACGAGC
TGGACAGCTATGCCCTGACCCATGGCCTGGATACCAAGCAGATTATCGAAGGCGTGGGCCTGGATCCGCGTATTGGCAGC
CACTACAACAATCCTTCGTTTGGCTATGGTGGCTACTGCCTGCCCAAGGACACCAAGCAATTGCTGGCGAACTTCAACAA
TGTGCCGCAAACGCTGATCAACGCCATTGTGCAGTCCAACACCACCCGCAAGGACTTCGTGGCGGACAGCATCATCAAGC
GCAAGCCAAATGTCGTTGGTATCTATCGCCTCATCATGAAGAGCGGTTCAGATAACTTCCGCGCCTCCAGCATCCAGGGC
ATCATGAAGCGGATCAAGGCCAAGGGCATTGAGGTGATTGTGTATGAACCTGTGCTCACGGAGCCCGAGTTCTTCCGCTC
CAAGGTGGTGAATGATCTGGAAGCCTTCAAGCAAAAGGCCGATGTGATCGTGTCCAACCGCATGGCCAAGGAACTGGCGG
ATGTGGCGGACAAGGTGTTTACGCGCGATTTGTTTGGTAGCGATTGA

Protein sequence : 
MKIAIAGTGYVGLSMAVLLAQKNEVVALDIVPEKVEMLNRKQSPIADAEIEEYLATKTLNFKATMDKQAAYEGADYVIIA
TPTDYDPETNYFNTGSVEAVIRDVKTYAPNAVMVIKSTIPVGFTVGARDKYQTNNLIFSPEFLREGKALYDNLYPSRIVV
GEKSARAETFARLLQEGALKENIPLLFTDSSEAEAIKLFANTYLAMRVAYFNELDSYALTHGLDTKQIIEGVGLDPRIGS
HYNNPSFGYGGYCLPKDTKQLLANFNNVPQTLINAIVQSNTTRKDFVADSIIKRKPNVVGIYRLIMKSGSDNFRASSIQG
IMKRIKAKGIEVIVYEPVLTEPEFFRSKVVNDLEAFKQKADVIVSNRMAKELADVADKVFTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-90 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msip34_1725 YP_003051497.1 nucleotide sugar dehydrogenase VFG0963 Protein 9e-103 58