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Name : Msip34_1607 (Msip34_1607) Accession : YP_003051379.1 Strain : Methylovorus glucosetrophus SIP3-4 Genome accession: NC_012969 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : 2.7.7.7 Position : 1720264 - 1721538 bp Length : 1275 bp Strand : + Note : PFAM: UMUC domain protein DNA-repair protein; KEGG: eba:p2A244 DNA repair protein DNA sequence : ATGAAGCGTGCCATTGCCCTGATCGATGTCAATAACTTCTACGCCAGCTGCGAGCGCGTGTTTAACCCTGCCTTGAAAGA TCGCGTGGTTGTGGTGCTGTCGAATAATGACGGCTGCGTGGTGGCGCGTAGCGCCGAGGCAAAGGCACTGGGTATCAAGA TGGGTGTACCGTGGTTTCAGCTGAAGGATGAGGCCAGGCGCTACAAGATCTTGGCGCTGTCGAGCAATTACGCGCTGTAT GCCGATATGAGCAACCGGGTGATGAAGATCATTAGCCAGTACGCGCCCACACAAGAGGTCTACAGCATCGATGAGTCGTT CCTGGACCTCACCGGCATGCCCGGGCGGCACGCGGACATCGCGCAGAAAATGCGCGGGCAGATAAGGCAGTGGACTGGCC TGCCAGTATGCGTGGGAATTGGGCCGAGCAAGACGCTGGCCAAGCTGGCCAACCATACGGCAAAGAAAAAGCTGCTGGAT GATTCTGGCGTGTGCGACTTCAATGCGCTGCCGGTTGAGCAGCTGGACGCGACCATGGCCAGGATTGAGGTTGGAGAGAT TTGGGGCGTAGGCCGAAAGTTGTCGGCCAAGCTGATCGACCTCGGTATCAAGACTGCGCTGGACTTGCGCCGGCAGGATC CGGAGCACATGCGCCAGCAATTCAGCGTCGTGATGGAAAAGACCGTGCGGGAGCTGCAGGGGCATGCCTGCATGGAGCTG GAAGAAGTGGTACCGGACAAGCAGCAGATCATCTCAAGCCGGTCATTTGGCTACCCCGTGGAGGATCAGCAGAGCATTGC CGAGGCGATCAGCCTATATGTGAGCCGGGCTGCCGAGAAGCTGCGCGCCCAGCAGGGATATGCCAGCACGCTGCACGTGT TTATTCACACCTCGCCATTCGGCGACGGCCCTAAGTACAGCAACAGTCTGACGGTTCCGCTTCCCTCCCCGACCGATGAC ACAATGCAACTGATCGGCGTGGCGCTCTGGATCCTGAAGCGTATCTATAAACCAGGCTTTCGATATCAGAAAGCTGGAGT TATGCTTGGCGAAATTGTCCCAGTCGGCGGGCAGCAGAATGATCTGTTCGGCTTTACTGCTGAAGTGGAGAAGTCGGCCA GGCTGATGGCGGCCTTGGACTCGGTGAACAGGAAAATGGGGAAAGGTGCCTTGCGGTCAGCATCTCTGGGATATAGAGCG CCTTGGGCGATGAAACAAGAAACCAAGAGCCCTGCTTACACAACAGACTGGGGCGGTATCATTAGGTCAACTTAA Protein sequence : MKRAIALIDVNNFYASCERVFNPALKDRVVVVLSNNDGCVVARSAEAKALGIKMGVPWFQLKDEARRYKILALSSNYALY ADMSNRVMKIISQYAPTQEVYSIDESFLDLTGMPGRHADIAQKMRGQIRQWTGLPVCVGIGPSKTLAKLANHTAKKKLLD DSGVCDFNALPVEQLDATMARIEVGEIWGVGRKLSAKLIDLGIKTALDLRRQDPEHMRQQFSVVMEKTVRELQGHACMEL EEVVPDKQQIISSRSFGYPVEDQQSIAEAISLYVSRAAEKLRAQQGYASTLHVFIHTSPFGDGPKYSNSLTVPLPSPTDD TMQLIGVALWILKRIYKPGFRYQKAGVMLGEIVPVGGQQNDLFGFTAEVEKSARLMAALDSVNRKMGKGALRSASLGYRA PWAMKQETKSPAYTTDWGGIIRST |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 3e-83 | 48 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 3e-83 | 48 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 3e-85 | 48 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 3e-64 | 43 |
