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Name : Msip34_1429 (Msip34_1429) Accession : YP_003051201.1 Strain : Methylovorus glucosetrophus SIP3-4 Genome accession: NC_012969 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 1536728 - 1538110 bp Length : 1383 bp Strand : - Note : KEGG: mfa:Mfla_1330 primary replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase DNA sequence : ATGGCTGACGATATCCTTGAATCCCTGAAATTACCCCCGCATTCGGTAGAAGCCGAGCAGTCCGTGCTTGGCGGCCTGCT GCTTGAGAACGAGGCGATTGACCGTATTGCCGACCTGCTGGGACCTGCCGATTTTTATCGCCACGACCACAGGCTCATTT TTGAGCACATCGCGCGCCTCATCGAGCGTAACAAGCCTGCCGATATCGTTACCGTCGCCGAGTCGTTGGAGAATTCTGCG GAGCTGTCCGGTGTCGGCGGTATCGCTTATCTGGGGGCGCTGGCGCAAAACACGCCTACCGCCGCCAACATCCGCCGCTA TGCAGAAATCGTGCATGAGCGTGCCGTCATGCGCAAGCTGGTGGAAGTAGGATCTGGCATTGCCGAGAGTGCTTATAATC CGCAAGGGCGCGATGCCCAGCAGCTGCTGGATGAAGCCGAAGCCAAAATATTCCAGATCGCAGAAGGTGGACGCAAAACC TCGCAAGGCTTTCTGGACATGAAGACCATTCTGCCCAAGGTGGCAGACCGTATTGATTACCTCTACCAGCGCGAGAACCA GGGTGGCGTCACGGGCGTGCCTACTGGATTCAGCGATCTGGATGAGCGTACCTCTGGCTTCCAGCCTGGCGATCTGATTA TTGTCGCGGGTCGCCCATCCATGGGTAAAACAGCGTTCTCGCTGAATATTGCCGAGAATGTGGCGCTGGAAACCAAACTG CCTGTGGCCGTATTTTCGATGGAAATGGCGGCGACACAGCTCGCTGCCCGTATGATCGGTTCGGTAGGGCGCCTGGATCA GCACCGTATGCGTAACGGTAATCTGGAGGACGAGGACTGGGTGCGCCTCACCACCGCGCTGGGCAAGTTGAATGACGCCC CGGTATTCATTGACGAAGGCGCAGGCTTGAGCTCCTTTGAAGTGCGTGCGCGTGCGCGCCGTTTGCATCGCCAGACCGGC AAGCTGGGCTTGATCGTGGTCGACTATTTGCAGCTGATGACGGGTGCAGCTGGTCGGCAGAGTGAAAACCGCGCTACGGA AATCTCCGAAATCTCCCGCTCGCTCAAGGCCTTGGCGAAGGAGCTTGATGTGCCGGTAGTGGCATTGTCTCAGCTTAACC GCGGCCTGGAGCAGCGCACTGATAAACGTCCAGTCATGTCCGACTTGCGTGAATCCGGCGCTATCGAGCAGGATGCCGAC TTGATTCTGTTTATCTACCGTGATGAAGTCTACAACCCTGACTCACAGGACAAAGGCACGGCGGAAATCATTATCGCCAA GCAGCGTAACGGCCCGATTGGCCGGGTACGTCTTACCTTCATGGGCCAATTCACGCGATTCGAGAATCACGTCTCTGGCA GTTCCTTCCAGGACGAATATTAA Protein sequence : MADDILESLKLPPHSVEAEQSVLGGLLLENEAIDRIADLLGPADFYRHDHRLIFEHIARLIERNKPADIVTVAESLENSA ELSGVGGIAYLGALAQNTPTAANIRRYAEIVHERAVMRKLVEVGSGIAESAYNPQGRDAQQLLDEAEAKIFQIAEGGRKT SQGFLDMKTILPKVADRIDYLYQRENQGGVTGVPTGFSDLDERTSGFQPGDLIIVAGRPSMGKTAFSLNIAENVALETKL PVAVFSMEMAATQLAARMIGSVGRLDQHRMRNGNLEDEDWVRLTTALGKLNDAPVFIDEGAGLSSFEVRARARRLHRQTG KLGLIVVDYLQLMTGAAGRQSENRATEISEISRSLKALAKELDVPVVALSQLNRGLEQRTDKRPVMSDLRESGAIEQDAD LILFIYRDEVYNPDSQDKGTAEIIIAKQRNGPIGRVRLTFMGQFTRFENHVSGSSFQDEY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-103 | 52 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-89 | 50 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-89 | 49 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-88 | 47 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-89 | 47 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 7e-84 | 46 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 7e-84 | 46 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 6e-90 | 44 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-76 | 43 |
