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Name : Msip34_1164 (Msip34_1164) Accession : YP_003050938.1 Strain : Methylovorus glucosetrophus SIP3-4 Genome accession: NC_012969 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : 2.7.7.7 Position : 1237319 - 1238611 bp Length : 1293 bp Strand : - Note : PFAM: UMUC domain protein DNA-repair protein; KEGG: ece:Z1947 DNA polymerase V subunit UmuC DNA sequence : ATGTCATTACCGCAGCCACTTAAATCGGTTTATGCGCTCGCGGATGCCAACTCGTTTTATGCCTCTTGCGAAAAGGTATT CAGGCCCGAACTGGAGGGCAAGCCGGTGGTGGTGCTATCGAATAACGATGGCTGTGTGATTGCACAAAGCAAGGAAGCCA AGGCCGCGCTTGCTCTGTATATGTGCCGTCCCTGGTTTGAGGTGAAAGAGGCTGCCGAGAAAATTGGCACTATCGCTTTC TCGTCCAATTACGAGTTATACGGGGCGATGAGCAATCGCTTTGTGCAGACGCTCAGGCATTTCAGCCCACGGGTGGAGGT GTACTCCATCGACGAATCGTTTATGGATATGACTGGTCTCAGGCGCGATCTCAGTGTGTATGGTCATGAGATCAAACACA CCGTCAGGCAATGGACCGGCTTACCTATTTGCATTGGATTTGGTCACTCCAAGACTCTGGCTAAATTGGCCAACCACTGC GCAAAAAAACAGCCTGGATGGGATGGCGTATGTGACCTGACCAGCTTGAGCGTGCCTGAACTTGACCACTTACTTGCATC GTTGGAAATTTCGACGGTCTGGGGAGTAGGTAAACGCCTTGAACGACGCTTACATGCCGTGGGGGTCACTAACGTGCTGC GGCTGAAACATGCAGACCCCAAACGTATCCGTGACAAATTTGGCGTACTGCTGGAACGCACGGTGCGCGAGTTGAATGGC GAAGTATGGCTTGAGCTGGACCAGATGGTGCCCGAGGCCAATCAGGTCATGTCATCCCGCTCGTTTGGGCATCGCCTTGA TTCGTTAACAGACCTTCAGGCCGCCATCAGCTTTCACGCGGGCAATGCCGCCGAGCGCATGCGCAAAAAAGGGCTATATG CCAACGCCGTGTATGTGTTCATACAGAATAGCCCGCATGACGAAGCCCCTTATTACTGCGGCCAGCAGATGATTGCCCTG CCCTCACCCACCAACAGCACCCAGCAAATTACCAAGGCGGCGTTATGGCTGCTGAATAAAGTTTATCAACCGGGTGTTTA CTACCTCAAAGGCGGCGTCATGCTGATGGAGCTGGTGGCAGAAGGCGGCCAGCAACGCGAACTCTTTGGTTTCAGCCAGC AGGACAGTAAAAACCATCGTTTGATGGGGATGATCGACAAGGTGAACGCCAAATATGGCCGAGGCACAGTCAAGACCGCG GCTGAGGGCGTCAGGCAGGATTGGCAGATGCGACGTGTGCTTAAAAGTCCGGGGTATCTACATCAATGGAAGGATTTGCT TAAGGTCAGATAA Protein sequence : MSLPQPLKSVYALADANSFYASCEKVFRPELEGKPVVVLSNNDGCVIAQSKEAKAALALYMCRPWFEVKEAAEKIGTIAF SSNYELYGAMSNRFVQTLRHFSPRVEVYSIDESFMDMTGLRRDLSVYGHEIKHTVRQWTGLPICIGFGHSKTLAKLANHC AKKQPGWDGVCDLTSLSVPELDHLLASLEISTVWGVGKRLERRLHAVGVTNVLRLKHADPKRIRDKFGVLLERTVRELNG EVWLELDQMVPEANQVMSSRSFGHRLDSLTDLQAAISFHAGNAAERMRKKGLYANAVYVFIQNSPHDEAPYYCGQQMIAL PSPTNSTQQITKAALWLLNKVYQPGVYYLKGGVMLMELVAEGGQQRELFGFSQQDSKNHRLMGMIDKVNAKYGRGTVKTA AEGVRQDWQMRRVLKSPGYLHQWKDLLKVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 6e-75 | 43 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 6e-75 | 43 |
