Gene Information

Name : Msip34_0102 (Msip34_0102)
Accession : YP_003049878.1
Strain : Methylovorus glucosetrophus SIP3-4
Genome accession: NC_012969
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 118628 - 119443 bp
Length : 816 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1561 ABC transporter related

DNA sequence :
ATGGCAGTGACAAGGGCAGTAATCGATTTCAGGCGGAGTGAAGAGCCAAAAGATGAGGCAGAGCAGCAGCCTGCGTCGTA
TGCGCTACAGCTGGATCATGTATCCAAAAGCTACCTCCTGCATGGCGAACCGCTCAAGGTGCTGGATGATATCCAGCTGG
ATATCCGTTCTGGCGAGTTTGTCTCCATCGTCGGCGCCAGTGGTTGCGGCAAATCCACGCTACTGCGCCTGATTACCGGC
CTGGATGCGCAGTACCAGGGCAATATCGTGTATCAGGGCCAGCGTATCTCCGGTACGTCGCTCGATCGCAGCATTGTGTT
TCAGGAGCATCGCCTGTTCCCCTGGCTGACCGTGGAAGAAAACATTCTGCTGGCGTTTTCGGCGACCAATGTTTCGCAGG
AAGAGCGCCATGCCCGCGTCAAGGCGCAGATTGCCACCGTGGGGCTGACCGGCTTCGAGAAAGCCTATCCCCACCAGATT
TCGGGCGGCATGTCACAACGTGTCGCCATTGCCCGCGCGCTGGTGTTGCGGCCCCAGCTCCTGTTGCTGGATGAGCCATT
TGGCGCGCTGGACGTGCTGACCCGCATGAAGCTGCAACACGAACTGCAGCGCCTGTGGGAGCAAGAAGGATTAACCACGG
TGCTGGTGACCCATGATGTGGAAGAAGCCGTGTTCCTGGGCGACCGCATTGTGGTGATGACATCACACCCTGGCCGTATA
AAACGCATTGTCCCGGTAAAGCTGCCACGTCCGCGCATACGCTCGGCGAGTGAGTTTCAACGCATACGCGATGATGTATT
GAGCGATTTTATTTGA

Protein sequence :
MAVTRAVIDFRRSEEPKDEAEQQPASYALQLDHVSKSYLLHGEPLKVLDDIQLDIRSGEFVSIVGASGCGKSTLLRLITG
LDAQYQGNIVYQGQRISGTSLDRSIVFQEHRLFPWLTVEENILLAFSATNVSQEERHARVKAQIATVGLTGFEKAYPHQI
SGGMSQRVAIARALVLRPQLLLLDEPFGALDVLTRMKLQHELQRLWEQEGLTTVLVTHDVEEAVFLGDRIVVMTSHPGRI
KRIVPVKLPRPRIRSASEFQRIRDDVLSDFI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 7e-50 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-21 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-21 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-21 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-20 42