|
Name : Msip34_1059 (Msip34_1059) Accession : YP_003050833.1 Strain : Methylovorus glucosetrophus SIP3-4 Genome accession: NC_012969 Putative virulence/resistance : Unknown Product : K+-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 1116584 - 1118659 bp Length : 2076 bp Strand : - Note : TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: cvi:CV_1598 potassium-transporting ATPase B chain DNA sequence : ATGCATTCCCCCAAAGGCCTTTCCATGTTCGATACGCAGCTGATACTGCCTGCCATCGCACTTTCCTTCAAAAAACTGGC GCCGCAGGTGCAATGGCGCAACCCGGTGATGTTCGTCGTTTATCTGGGCAGCATGCTCACCACGCTCATGTTCATCCAGG CGCTGGTGCTTGAGTCGCATGGCAGCCATGGCGAAGCCCCGGCGGGCTTTATCCTGGCGATCAGCATCTGGCTGTGGTTT ACCGTGCTGTTTGCCAACTTTTCCGAGGCCCTGGCTGAGGGCCGCAGCAAAGCCCAGGCAGCGGCCCTGCGCAGCGCCAA GCAGAATGTGCCCGCCAAAAAACTGGCCAGCGCCTCCCGCCAGGCAGCCATCAGCATCACCGATAGCCAGAGCCTGCGCA AAGGCGACATTGTGCTGGTGGAAGCCGGGGACATGATCCCGGCCGATGGCGAGGTGCTGGAAGGCATTGCCTCGGTGAAT GAAGCCGCCATCACGGGTGAATCAGCCCCGGTCATCCGCGAATCCGGCGGCGATTTCAGCGCTGTTACCGGCGGCACGCA GGTGTTGTCGGACTGGCTGGTGGTGCGCATCAGCGTCAATCCCGGCGAGGCTTTTCTGGATCGCATGATCGCCATGGTGG AAGGCGCCAAACGCCAGAAAACCCCCAATGAAATCGCGCTGACCATACTGCTGGTAGCGCTGACCATTGTCTTTCTGCTG GCAACCGTCACCCTGCTGCCGTTCTCCCTCTTCAGCGTGCATGCGGCCGGCGCAGGCGCCCCTGCCAGCATTACCGTGCT GATCGCGCTCGTGGTCTGCCTGATTCCCACCACCATTGCCGGTTTGCTTTCGGCGATTGGCGTGGCGGGCATGAGCCGCA TGATGCAGGCCAATGTCATCGCCACCTCGGGCCGCGCGGTCGAGGCCGCTGGCGATGTGGATGTGTTGCTGCTGGACAAG ACCGGCACCATCACGCTAGGCAACCGGCAGGCATCCATGTTTCTGCCTGCACCCGGCATCAGCGAGCAACAGCTGGCCGA TAGCGCACAGCTGGCCTCGCTGGCCGACGAAACGCCGGAAGGTCGCAGCATCGTCGTGCTGGCAAAAAACCGCTTCGCCC TGCGCGAGCGTGATCTGCAGGGCTTGCAAGCCGAGTTCGTGCCATTCTCGGCACAAACCCGCATGAGCGGCGTCAACCTC GGCGCCAGGCAGATTCGCAAAGGCGCTGCCTCGGCGATTCGCAGCTGGGTGGAATCGCAGGGCGGAAAATTTGCCCATGA AGTCAACCAGATGGTGGACGACATCGCCCGCCGTGGCAGCACCCCGCTGGTGGTAGCCGACGACGCCCGCGTGATGGGCG TGGTTGAGCTGAAAGATGTGGTGAAAGGCGGCATCAAGGAGCGCTTTGCCGAGCTGCGCAACATGGGCATCAAAACCGTG ATGATCACCGGCGATAACCGCCTCACGGCCGCCGCCATTGCCGCCGAAGCGGGCGTGGATGACTTTCTGGCCGAAGCCAC GCCGGAAGCCAAGCTCAAGCTGATACGCGAGCATCAGTCGGCAGGCAAGCTGGTGGCGATGACCGGCGATGGCACCAATG ATGCCCCCGCACTGGCGCAAGCCGATGTTGCTGTCGCCATGAACACCGGCACCCAGGCCGCCAAGGAAGCCGGCAATATG GTGGATCTCGACTCCAACCCGACCAAGCTGATTGAGATCGTGGAGATCGGCAAGCAGATGCTGATGACGCGTGGCTCGCT CACCACTTTCAGCATTGCCAACGATATTGCCAAGTATTTCGCCATCATCCCGGCCGCGTTTGCTAGCACTTATCCGCAGC TCAATACGCTGAATGTCATGCACCTCGCCAGCCCGGAGTCGGCCATTCTATCGGCGGTGATTTTCAATGCGCTGGTGATC ATGTTTCTGATTCCGCTGGCGCTGAAAGGCGTGCCCTATCGCGCCGCCAGTGCCGCCAGCCTGCTGCGTGGCAATCTGCT GATCTACGGCGTAGGCGGTGTGGTGGTGCCTTTTGTCGGCATCAAGCTGATCGACCTGTTGCTGCAAATGCTCTAG Protein sequence : MHSPKGLSMFDTQLILPAIALSFKKLAPQVQWRNPVMFVVYLGSMLTTLMFIQALVLESHGSHGEAPAGFILAISIWLWF TVLFANFSEALAEGRSKAQAAALRSAKQNVPAKKLASASRQAAISITDSQSLRKGDIVLVEAGDMIPADGEVLEGIASVN EAAITGESAPVIRESGGDFSAVTGGTQVLSDWLVVRISVNPGEAFLDRMIAMVEGAKRQKTPNEIALTILLVALTIVFLL ATVTLLPFSLFSVHAAGAGAPASITVLIALVVCLIPTTIAGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVLLLDK TGTITLGNRQASMFLPAPGISEQQLADSAQLASLADETPEGRSIVVLAKNRFALRERDLQGLQAEFVPFSAQTRMSGVNL GARQIRKGAASAIRSWVESQGGKFAHEVNQMVDDIARRGSTPLVVADDARVMGVVELKDVVKGGIKERFAELRNMGIKTV MITGDNRLTAAAIAAEAGVDDFLAEATPEAKLKLIREHQSAGKLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNM VDLDSNPTKLIEIVEIGKQMLMTRGSLTTFSIANDIAKYFAIIPAAFASTYPQLNTLNVMHLASPESAILSAVIFNALVI MFLIPLALKGVPYRAASAASLLRGNLLIYGVGGVVVPFVGIKLIDLLLQML |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-170 | 64 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 1e-170 | 64 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 5e-142 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-140 | 55 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-140 | 55 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-140 | 55 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-140 | 55 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-140 | 55 |
