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Name : Msip34_1026 (Msip34_1026) Accession : YP_003050800.1 Strain : Methylovorus glucosetrophus SIP3-4 Genome accession: NC_012969 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1083664 - 1085343 bp Length : 1680 bp Strand : + Note : PFAM: type II secretion system protein E; KEGG: tbd:Tbd_1295 type II secretion system protein DNA sequence : ATGAGCCTGATCAGCGCACAAACCCTGGGAACAGCCCGGCAGTTGGCGGCACAGTCCAGTCGCCGCCTGATGGAAGTGCT GCAAGACCAGAGCGCCATGGCACCAGAGGCATTTGTCGCCGAGCTGTCACACGCATTGCATTACCCGGTGCTGGATAACC GCACCATGCACGCGCTCAGCACCGATTTTGAGGTCATGCCGTTTGCCGAGGCTTATCGCCGCGAATGCATTCCCCTGCGG GGCGAAGATGGTCAGCTGCTGATAGTAATTGCCGATCCGTTTGCCAGCGACATTCAGGCCTGGCTGCTCGACACCGTGCA CGAGCCATTCACGCTCTATCTCGCGCATTATGCCGATGTCAGCGCCTTTCTCTCGCGCCATGAAGAAACCCTGAATGCCA TGGACCGGGTGCTGGGCGGCGATATGGCGCCCGATGCCCATCCTGTACATGCAGATGGAGTAGAGCATCTTTCCTTAAGC CGTATTTCCGAAGACAGCAGCCCGGTGATCCGCCTGGTGAATTCCACGCTGTATGACGCCATGAAGATAGGTGCCAGCGA TATACACCTCGAAACCACGCTGACTGGCCTTGCCCTCAAATACCGCATTGATGGTGTGCTGGATGCCGTGGGCCAGATAC AGGGCGTGGACATGGCCGAGCAGATCGTGTCGCGCATCAAGGTCATGGCCGAGCTCGATATTGCCGAGCGCCGCATCCCG CAGGATGGCCGTTTCAAGGTGCATATCCAGCAGCGCGAGGTCGATCTGCGCGTATCCATCATGCCCAGCGTCTATGGCGA AGATGCGGTGTTGCGTATCCTGGATCGCAAGTCGCTCACCGAGCAATCCCGCGGACTCACACTGGAAAATGTCGGCCTTG ATGCCCTGACGCGCCAGCAGTTTCGTGCCCTGGCCCGCGAGCCCTACGGCATGGTGCTGGTCACCGGGCCCACTGGTAGC GGCAAGACCACTACGCTATATGCGGCCATTTCCGAAGTGAATACCGGCCGCGACAAGATTATTACCATCGAAGACCCGGT GGAGTACAACTTGCCCGGTGTGCTGCAGATTCCGGTCAATGAGAAAAAAGGCCTGACCTTTGCCCGTGGCCTGCGCTCCA TATTGCGGCACGACCCGGACAAGATCATGGTCGGCGAAATCCGCGATTCGGAAACGGCGCAGATTGCCGTGCAGTCCGCC TTAACAGGCCATCTGGTGTTTACCACCGTGCACGCCAACAACGTGTTTGATGTCATCGGCCGCTTTATCAATATGGACGT TGATACCTACAGTTTTGTCTCCGCGCTCAATGGCATTCTGGCGCAGCGGCTGGTGCGCCTCAATTGCACGCATTGCCTGG TGGATGACCAGCCGGATGCCGGGCTGCTGCAGGCTTCCATGATCAGCGAGACCGAGGCCGCCAGCATGCAGTTTCGCAAG GGCCAGGGCTGCGGCCATTGCCGTGGCAGCGGCTACAAGGGCCGCATGGCGGTGGCAGAGCTGTTGATTCTGGATGATGA AATCCGCGAGATGATCGTCTCGCGCCAGCCCATACGCCAGCTCAAGGACACCGCGCGCCGCAAGGGCCTGCGCCTATTGC GCCAGGCCGCTGTTGAAGCCGTGGCCGAGGGCAAAACCACACTGGAAGAAATCAATCGTGTTACCTTCATCACGGCCTAG Protein sequence : MSLISAQTLGTARQLAAQSSRRLMEVLQDQSAMAPEAFVAELSHALHYPVLDNRTMHALSTDFEVMPFAEAYRRECIPLR GEDGQLLIVIADPFASDIQAWLLDTVHEPFTLYLAHYADVSAFLSRHEETLNAMDRVLGGDMAPDAHPVHADGVEHLSLS RISEDSSPVIRLVNSTLYDAMKIGASDIHLETTLTGLALKYRIDGVLDAVGQIQGVDMAEQIVSRIKVMAELDIAERRIP QDGRFKVHIQQREVDLRVSIMPSVYGEDAVLRILDRKSLTEQSRGLTLENVGLDALTRQQFRALAREPYGMVLVTGPTGS GKTTTLYAAISEVNTGRDKIITIEDPVEYNLPGVLQIPVNEKKGLTFARGLRSILRHDPDKIMVGEIRDSETAQIAVQSA LTGHLVFTTVHANNVFDVIGRFINMDVDTYSFVSALNGILAQRLVRLNCTHCLVDDQPDAGLLQASMISETEAASMQFRK GQGCGHCRGSGYKGRMAVAELLILDDEIREMIVSRQPIRQLKDTARRKGLRLLRQAAVEAVAEGKTTLEEINRVTFITA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-79 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-79 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Msip34_1026 | YP_003050800.1 | type II secretion system protein E | VFG0182 | Protein | 7e-80 | 45 |
| Msip34_1026 | YP_003050800.1 | type II secretion system protein E | VFG2048 | Protein | 4e-79 | 45 |
| Msip34_1026 | YP_003050800.1 | type II secretion system protein E | VFG1876 | Protein | 3e-74 | 43 |
| Msip34_1026 | YP_003050800.1 | type II secretion system protein E | VFG0233 | Protein | 3e-72 | 42 |
