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Name : Mmol_0222 (Mmol_0222) Accession : YP_003047659.1 Strain : Methylotenera mobilis JLW8 Genome accession: NC_012968 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 242524 - 245745 bp Length : 3222 bp Strand : - Note : KEGG: rfr:Rfer_4010 HsdR family type I site-specific deoxyribonuclease; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase DNA sequence : ATGTCGAAAATCACAGAATCTGATATCGAAACCTTAGCCATTGAGCGCCTGCAAGCGCTTGGGTTTAGCTATGTATATGC GCCGGATATTGCGCCCGACTCAACCACCCCAGAACGTGAAAGCTTTGCTGAGGTGCTTTTACTCAGTCGCCTGCGCAATG CCATTACACGTATTAACCCTACCCTACCTGCCACAGCTTTAGACGAAGCAATTAAAACTATCCAACGTATTAGCTCCCCT GAACTGCTAGCTAATAACGAAACATTTCACAGATTACTTAGAGAGGGTGTGAATGTAAGTTATCAAAAAGATGGCTTACA ACGCGGTGACTTGGTATGGTTGATTGATTTTATCAACCCACAAAACAATGACTTTGTTGTAGCGAATCAATTCAAGATCA TTGAAAACAACCAAAATAAACGACCAGATGTGATTTTGTTTGTAAATGGCATTCCACTGGTAGTCATTGAACTTAAAAAT GCAGCCGATGAAAACGCCACCATTAAAACTGCATACCAGCAACTAAATACCTACAAAGAAACCATCCCTAGCCTATTTAC CTACAATGGTTTTGTAATTGTTTCAGATGGACTAGAAGCAAAAGCTGGTTCTATCTCTGCCGGATTTAGTCGTTTTATGG CGTGGAAAACTGCTGATGGTAAAAGTGAGGCATCAAAGCTTACCGGCCAATTAGAAACATTAATCAACGGCATGTTGAAC AAATCAACATTGCTGGATTTGATTCGTCATTTCATTGTGTTTGAGAAATCTTCCAAAGAAGGTCCAAAACAAGCTGATGG TACTCCAGGTCTAATCAGCATTAGTACAGTCAAGAAGCTTGCTGCATACCATCAATACTACGCAGTGAATGCAGCAGTTA TCTCAACATTAAGGGCTACCGCTGAAGCGGTAAGCTTAGCTCAAACACCTGCAAGTTATGGTTTAAGTGATGTACGCAAT CAACCAAATGGAGATCGTAAAGCTGGTGTTGTTTGGCATACTCAAGGCAGTGGCAAATCACTCTCCATGGTGTTTTATAC AGGCAAAATTGTCCTAGCACTGAACAACCCAACCATCTTGGTAATTACCGATAGGAACGACCTAGATGACCAGCTGTTTG ATACTTTTGCATCTTCCTCACAACTACTTCGCCAAGAGCCAAAACAGGTAGAGGATCGCCAACAACTTAAAGAGCTCTTA AAAGTAGCTTCTGGTGGTGTTATTTTTACTACCATCCAAAAATTTCAACCTGAAGAAGGTAATGTTTACGAAACATTATC TGATCGTAGAAACATTGTAGTGATTGCTGATGAAGCACATAGAACACAATATGGCTTTAAAGCAAAAACTGTAGACGACA AGAACAAGGCTGGTGATGTCATTGGCCAAAAGATTGTGTATGGCTTTGCTAAATACATGCGCGATGCTTTACCAAATGCA ACCTATCTGGGTTTTACGGGCACACCGATTGAAAGCACGGATGTAAACACACCAGCAGTATTTGGTAATTATGTTGATAT TTATGACATCGCTCAAGCTGTTGAAGATGGTGCCACAGTTCGTATTTATTACGAAAGCCGACTGGCTAAGGTTCAATTAA GTGATGAAGGCAAGAAGCTTGTTGCCGAACTTGATGAGGAACTAGAGCAAGACGAGCTTACGGAAACACAAAAAGCCAAA GCAAAGTGGACACAAATTGAAGCATTGATTGGTAGTGAAAATCGCATTAAAAATGTTGCACAAGATATTGTCGCCCACTT TGAGCAACGACAGGAAGTGTTTGACGGCAAAGGCATGATTGTTAGCATGTCTCGGAGAATCGCTGCCGAGCTATATGATG CCATTATTAAGCTGAAGCCTGAGTGGCATTCAAACGAACCTCACAAAGGTGTCATCAAGGTCGTGATGACTGCAGCCTCT GCTGATGGACCAATGCTTGCCAAACACCACACAACCAAGCTACAACGCAAAGCACTAGCTGAGCGAATGAAAGACCCTGA CGACGAATTAAAACTCGTTATCGTGCGTGATATGTGGCTTACTGGCTTTGATGCGCCCAGCATGCATACCTTATACATTG ATAAGCCGATGAAAGGTCATAACCTAATGCAAGCGATTGCTAGGGTTAATCGGGTTTATAAAGATAAGCCAGGTGGATTG ATAGTTGACTATCTTGGTATTGCATCAGACCTTAAAGAAGCGTTGTCATTTTATTCTGATGCCGGTGGCAAAGGTAACCC AGCAGAAACACAAGAGCAAGCAGTAGCTCTGATGTTAGAAAAGCTAGAAATTGTCTCTGACATGTATCACGGCTTTCCTT ATGAAGATTACTTTGAAGCCGACACCTCCAAAAAACTCTCTTTAATCCTTGCTGCTGAAGAGCACATTCTTGGCATTGAT GATGGCAAGCGACGTTATGTGAATGAGGTGACTGCATTATCTCAAGCTTTTGCGATTGCCATTCCACACGATCAAGCCAT GGATGTCAAAGATGAGGTTGCTTTCTTTCAAGCTGTAAAAGCACGACTAGCTAAATTTGACAGCACAGGCAATGGTAGAA CAGATGAGGAAATTGAAACCACTATACGCCAGGTGATTGATCAAGCCTTAGTATCTGAACAAGTAATTGATGTATTTGAT GCTGCTGGCATCAAGAAGCCTGACATCTCTATATTGTCTGAAGAGTTTTTACTTGAGCTTAAAAACCATGAGCATAAAAA TGTCGCACTGGAAGTGCTTAAAAAATTGCTCAATGATGAACTCAAAGTACGTGCCAAGAAGAACCTAGTGCAAAGTAAAA GCTTGATGGAAATGTTAGAGAACGCCATCAAAAAGTATCACAACAAAATACTCACTGCAGCAGAGGTCATGGATGAGTTG ATTAAGATTAGTAAAGAGATTGTCGCCTCTGATAATGAAGCTAAAGGGCTTGGCTTATCTGAGTTTGAGTATGCCTTTTA CTCAGCCGTTGCTAGCAATAATAGTGCTAAAGAACTTATGCAACACGAGCAGCTACGTGAGCTAGCCGTTGTATTAACAC AACGTGTTAGAGAAAATGCATCCATTGACTGGACGATTAAGGAAAACGTCAAAGCCAAACTGAAAGTGATCATAAAACGC ACTCTGCGCCAATTTGGCTACCCGCCTGATATGCAGTTACTAGCAACCGAGACAATCATGAAACAAGCTGAAATGATTGC TACAGAATTAACAAAAGGCTAA Protein sequence : MSKITESDIETLAIERLQALGFSYVYAPDIAPDSTTPERESFAEVLLLSRLRNAITRINPTLPATALDEAIKTIQRISSP ELLANNETFHRLLREGVNVSYQKDGLQRGDLVWLIDFINPQNNDFVVANQFKIIENNQNKRPDVILFVNGIPLVVIELKN AADENATIKTAYQQLNTYKETIPSLFTYNGFVIVSDGLEAKAGSISAGFSRFMAWKTADGKSEASKLTGQLETLINGMLN KSTLLDLIRHFIVFEKSSKEGPKQADGTPGLISISTVKKLAAYHQYYAVNAAVISTLRATAEAVSLAQTPASYGLSDVRN QPNGDRKAGVVWHTQGSGKSLSMVFYTGKIVLALNNPTILVITDRNDLDDQLFDTFASSSQLLRQEPKQVEDRQQLKELL KVASGGVIFTTIQKFQPEEGNVYETLSDRRNIVVIADEAHRTQYGFKAKTVDDKNKAGDVIGQKIVYGFAKYMRDALPNA TYLGFTGTPIESTDVNTPAVFGNYVDIYDIAQAVEDGATVRIYYESRLAKVQLSDEGKKLVAELDEELEQDELTETQKAK AKWTQIEALIGSENRIKNVAQDIVAHFEQRQEVFDGKGMIVSMSRRIAAELYDAIIKLKPEWHSNEPHKGVIKVVMTAAS ADGPMLAKHHTTKLQRKALAERMKDPDDELKLVIVRDMWLTGFDAPSMHTLYIDKPMKGHNLMQAIARVNRVYKDKPGGL IVDYLGIASDLKEALSFYSDAGGKGNPAETQEQAVALMLEKLEIVSDMYHGFPYEDYFEADTSKKLSLILAAEEHILGID DGKRRYVNEVTALSQAFAIAIPHDQAMDVKDEVAFFQAVKARLAKFDSTGNGRTDEEIETTIRQVIDQALVSEQVIDVFD AAGIKKPDISILSEEFLLELKNHEHKNVALEVLKKLLNDELKVRAKKNLVQSKSLMEMLENAIKKYHNKILTAAEVMDEL IKISKEIVASDNEAKGLGLSEFEYAFYSAVASNNSAKELMQHEQLRELAVVLTQRVRENASIDWTIKENVKAKLKVIIKR TLRQFGYPPDMQLLATETIMKQAEMIATELTKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 48 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 48 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 46 |
